RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TNKSO95271 1327 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 A0A0A6YYK5 440 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 KDM1AO60341 852 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 HMGCRP04035 888 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 CD40P25942 277 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 CD38P28907 300 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 IARSP41252 1262 aaKnown RBP3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 ETV4P43268 484 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 GPR3P46089 330 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 RGS3P49796 1198 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 C21orf58P58505 322 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 STILQ15468 1287 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 SYDE2Q5VT97 1194 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 KANK2Q63ZY3 851 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 IQSEC1Q6DN90 963 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 UNQ6494/PRO21346Q6UXR6 183 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 KANSL1Q7Z3B3 1105 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 CXorf67Q86X51 503 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 LYSMD2Q8IV50 215 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 LMBR1Q8WVP7 490 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 ERCC4Q92889 916 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 MTMR8Q96EF0 704 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 ORAI2Q96SN7 254 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 FOXB1Q99853 325 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 POFUT1Q9H488 388 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 INCENPQ9NQS7 918 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 C14orf119Q9NWQ9 140 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 MSRAQ9UJ68 235 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 TMPRSS11EQ9UL52 423 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 PPP2R3BQ9Y5P8 575 aa3.99□□□□□ -1.77
HMGB1P30-201ENST00000492455 UBA6A0AVT1 1052 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 H2AFYO75367 372 aaKnown RBP3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 LMNAP02545 664 aaKnown RBP3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 HSP90B1P14625 803 aaKnown RBP3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 MANFP55145 182 aaKnown RBP3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 KRTAP10-9P60411 292 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 IL13RA1P78552 427 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 ITKQ08881 620 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 KLF1Q13351 362 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 CNGB1Q14028 1251 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 ABCB5Q2M3G0 1257 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 WDR72Q3MJ13 1102 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 Q6ZPA2 131 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 USP30Q70CQ3 517 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 PASD1Q8IV76 773 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 SLC41A1Q8IVJ1 513 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 ZZZ3Q8IYH5 903 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 HIPK4Q8NE63 616 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 AHCYL2Q96HN2 611 aaKnown RBP3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 MAML3Q96JK9 1138 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 MYL10Q9BUA6 226 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 NRDE2Q9H7Z3 1164 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 GALNT8Q9NY28 637 aa3.98□□□□□ -1.77
HMGB1P30-201ENST00000492455 PRSS38A1L453 326 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 MATN2O00339 956 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 RPS6KA4O75676 772 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 PRPF6O94906 941 aaKnown RBP3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 CLEC2LP0C7M8 214 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 ECE1P42892 770 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 MEOX1P50221 254 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 SLC6A3Q01959 620 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 MCL1Q07820 350 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 RRP1BQ14684 758 aaKnown RBP3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 TTF1Q15361 905 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 PITRM1Q5JRX3 1037 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 TTC38Q5R3I4 469 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 STRIP1Q5VSL9 837 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 FRMD7Q6ZUT3 714 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 PRIMA1Q86XR5 153 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 BCL6BQ8N143 479 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 ANKRD35Q8N283 1001 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 TMEM176AQ96HP8 235 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 SMAD5Q99717 465 aaKnown RBP3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 HAPLN2Q9GZV7 340 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 USP36Q9P275 1121 aaKnown RBP3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 ARHGAP28Q9P2N2 729 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 FBXO10Q9UK96 956 aa3.97□□□□□ -1.77
HMGB1P30-201ENST00000492455 TRIM75PA6NK02 468 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 ZAR1LA6NP61 321 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PCDHGA12O60330 932 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 MAFO75444 373 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 ALDH1L1O75891 902 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 MT-CO1P00395 513 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PFKMP08237 780 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 KCNQ1P51787 676 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 SCAND1P57086 179 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 ADCY1Q08828 1119 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 TRIM25Q14258 630 aaKnown RBP3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 CT83Q5H943 113 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 ODR4Q5SWX8 454 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 SLFN12LQ6IEE8 588 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 KCNK18Q7Z418 384 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 NME9Q86XW9 330 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PHYKPLQ8IUZ5 450 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 SYNE4Q8N205 404 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 C7orf31Q8N865 590 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 C1orf162Q8NEQ5 155 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 TGFBRAP1Q8WUH2 860 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 HAS1Q92839 578 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms