RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 SPG21Q9NZD8 308 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 RGL1Q9NZL6 768 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 STK24Q9Y6E0 443 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 NEMFO60524 1076 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 ZC3H11AO75152 810 aaKnown RBP eCLIP12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 EOMESO95936 686 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 SFPQP23246 707 aaKnown RBP eCLIP12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 SP100P23497 879 aaPredicted RBP12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 PPM1AP35813 382 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 AFF1P51825 1210 aaKnown RBP12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 PTPN5P54829 565 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 BCAR1P56945 870 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 CYP4A11Q02928 519 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 CTTNQ14247 550 aaKnown RBP12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 CBX2Q14781 532 aaPredicted RBP12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 ATL3Q6DD88 541 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 PDE12Q6L8Q7 609 aaKnown RBP12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 TMEM184AQ6ZMB5 413 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 CATSPER4Q7RTX7 472 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 BMP8AQ7Z5Y6 402 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 ZNF410Q86VK4 478 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 EXOC8Q8IYI6 725 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 PRSS33Q8NF86 280 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 RPGRIP1Q96KN7 1286 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 CEP170P1Q96L14 293 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 CDCA3Q99618 268 aaPredicted RBP12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 PRRX2Q99811 253 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 JPH2Q9BR39 696 aaPredicted RBP12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 TRAIPQ9BWF2 469 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 VN1R3Q9BXE9 311 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 DHX33Q9H6R0 707 aaKnown RBP12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 NRDE2Q9H7Z3 1164 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 AGPAT5Q9NUQ2 364 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 TBC1D13Q9NVG8 400 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 DACT1Q9NYF0 836 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 DNAJB4Q9UDY4 337 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 CFAP45Q9UL16 551 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 INPP5FQ9Y2H2 1132 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 COL4A3BPQ9Y5P4 624 aa12.27□□□□□ -0.45
TMEM39A-211ENST00000491685 C2orf71A6NGG8 1288 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 CLASP2O75122 1294 aaKnown RBP12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 OFD1O75665 1012 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 P4HBP07237 508 aaKnown RBP12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 SRGAP2BP0DMP2 458 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 ZSCAN22P10073 491 aaPredicted RBP12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 TXKP42681 527 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 DNM2P50570 870 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 EMC2Q15006 297 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 EPHA7Q15375 998 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 UBXN11Q5T124 520 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 KANK3Q6NY19 840 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 AGMOQ6ZNB7 445 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 TMC7Q7Z402 723 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 FERMT3Q86UX7 667 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 PRPF31Q8WWY3 499 aaKnown RBP12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 PHF7Q9BWX1 381 aaPredicted RBP12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 MRPL9Q9BYD2 267 aaKnown RBP12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 ZBP1Q9H171 429 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 NGRNQ9NPE2 291 aaKnown RBP12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 XPNPEP1Q9NQW7 623 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 CHST12Q9NRB3 414 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 PUF60Q9UHX1 559 aaKnown RBP12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 MTMR6Q9Y217 621 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 HCFC2Q9Y5Z7 792 aa12.26□□□□□ -0.45
TMEM39A-211ENST00000491685 WEE2P0C1S8 567 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 SRGAP2CP0DJJ0 459 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 YWHABP31946 246 aaKnown RBP12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 CA8P35219 290 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 SLC11A1P49279 550 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 POLGP54098 1239 aaPredicted RBP12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 KRT17Q04695 432 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 SMC1AQ14683 1233 aaKnown RBP12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 BMS1Q14692 1282 aaKnown RBP12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 DTHD1Q6ZMT9 781 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 ZNF280BQ86YH2 543 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 C4orf19Q8IY42 314 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 MRPL43Q8N983 215 aaKnown RBP12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 SLC7A3Q8WY07 619 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 EDAQ92838 391 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 INO80BQ9C086 356 aaPredicted RBP12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 GBP3Q9H0R5 595 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 TTC12Q9H892 705 aaPredicted RBP12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 PCDHB2Q9Y5E7 798 aa12.25□□□□□ -0.45
TMEM39A-211ENST00000491685 A0A087WWV3 80 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 ZNF623O75123 536 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 DDHD2O94830 711 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 GALTP07902 379 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 OR52Z1P0C646 297 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 EPCAMP16422 314 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 HOXA11P31270 313 aaPredicted RBP12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 RFC5P40937 340 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 ZXDAP98168 799 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 FOXK2Q01167 660 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 LAMTOR4Q0VGL1 99 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 PTGDRQ13258 359 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 PDIA5Q14554 519 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 XKR9Q5GH70 373 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 NOMO2Q5JPE7 1267 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 ARL6IP4Q66PJ3 421 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms