RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 DLGAP2Q9P1A6 1054 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 VPS54Q9P1Q0 977 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 SUCLA2Q9P2R7 463 aaPredicted RBP14.87□□□□□ -0.03
USF1-206ENST00000491629 FBXL21Q9UKT6 434 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 NAP1L2Q9ULW6 460 aaPredicted RBP14.87□□□□□ -0.03
USF1-206ENST00000491629 R4GN57 208 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 VWA8A3KMH1 1905 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 NRP1O14786 923 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 RFPL2O75678 378 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 PAPLNO95428 1278 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 GNA11P29992 359 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 RAB27AP51159 221 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 USP11P51784 963 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 RNF20Q5VTR2 975 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 PLA2G4FQ68DD2 849 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 Q6ZUG5 572 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 MIER3Q7Z3K6 550 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 RNF168Q8IYW5 571 aaPredicted RBP14.86□□□□□ -0.03
USF1-206ENST00000491629 SLC44A3Q8N4M1 653 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 ETNPPLQ8TBG4 499 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 TEKT3Q9BXF9 490 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 WDR6Q9NNW5 1121 aaKnown RBP14.86□□□□□ -0.03
USF1-206ENST00000491629 AGPAT5Q9NUQ2 364 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 IGSF9Q9P2J2 1179 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 WNT16Q9UBV4 365 aa14.86□□□□□ -0.03
USF1-206ENST00000491629 TRIP11Q15643 1979 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 CCDC195A0A1B0GUA6 201 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 EML1O00423 815 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 C2CD2LO14523 706 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 TEX28O15482 410 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 TDP2O95551 362 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 POMCP01189 267 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 SOD2P04179 222 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 SKIP12755 728 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 NPEPPSP55786 919 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 CDC42EP1Q00587 391 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 Q4G0T1 1027 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 KIAA0319Q5VV43 1072 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 SMG8Q8ND04 991 aaKnown RBP14.85□□□□□ -0.03
USF1-206ENST00000491629 ST13P5Q8NFI4 369 aaPredicted RBP14.85□□□□□ -0.03
USF1-206ENST00000491629 RDM1Q8NG50 284 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 TBCKQ8TEA7 893 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 CCDC12Q8WUD4 166 aaPredicted RBP14.85□□□□□ -0.03
USF1-206ENST00000491629 RIN2Q8WYP3 895 aaPredicted RBP14.85□□□□□ -0.03
USF1-206ENST00000491629 BRF1Q92994 677 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 NLRP4Q96MN2 994 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 EMILIN2Q9BXX0 1053 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 RSAD1Q9HA92 442 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 MIOSQ9NXC5 875 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 WRAP73Q9P2S5 460 aaPredicted RBP14.85□□□□□ -0.03
USF1-206ENST00000491629 EPS15L1Q9UBC2 864 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 CA14Q9ULX7 337 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 FAN1Q9Y2M0 1017 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 CLUHO75153 1309 aa14.85□□□□□ -0.03
USF1-206ENST00000491629 ACACBO00763 2458 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 CYP3A7-CYP3A51PA0A087WV96 503 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 CARNS1A5YM72 827 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 DDX11L8A8MPP1 907 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 M0R2N6 131 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 SPATA31D3P0C874 917 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 GLULP15104 373 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 CYP3A7P24462 503 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 DNM2P50570 870 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 NPY5RQ15761 445 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 SPATA31D4Q6ZUB0 917 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 COLGALT2Q8IYK4 626 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 KCNB2Q92953 911 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 MBOAT7Q96N66 472 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 RPS6KC1Q96S38 1066 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 TMEM175Q9BSA9 504 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 HERC2P3Q9BVR0 1158 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 RHOBTB2Q9BYZ6 727 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 INO80BQ9C086 356 aaPredicted RBP14.84□□□□□ -0.03
USF1-206ENST00000491629 TBC1D17Q9HA65 648 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 RXFP1Q9HBX9 757 aa14.84□□□□□ -0.03
USF1-206ENST00000491629 MRPL17Q9NRX2 175 aaKnown RBP14.84□□□□□ -0.03
USF1-206ENST00000491629 CCDC196A0A1B0GTZ2 297 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 POTEMA6NI47 508 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 INPPL1O15357 1258 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 LMNAP02545 664 aaKnown RBP14.83□□□□□ -0.04
USF1-206ENST00000491629 ALDH2P05091 517 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 DCNP07585 359 aaKnown RBP14.83□□□□□ -0.04
USF1-206ENST00000491629 GBP2P32456 591 aaPredicted RBP14.83□□□□□ -0.04
USF1-206ENST00000491629 AK2P54819 239 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 DSC1Q08554 894 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 KIAA2013Q8IYS2 634 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 BICD2Q8TD16 824 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 GPR152Q8TDT2 470 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 PGBD4Q96DM1 585 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 B3GALT6Q96L58 329 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 RNF26Q9BY78 433 aaPredicted RBP14.83□□□□□ -0.04
USF1-206ENST00000491629 AGXT2Q9BYV1 514 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 NCOA5Q9HCD5 579 aaKnown RBP14.83□□□□□ -0.04
USF1-206ENST00000491629 PRG3Q9Y2Y8 225 aaPredicted RBP14.83□□□□□ -0.04
USF1-206ENST00000491629 COL4A3BPQ9Y5P4 624 aa14.83□□□□□ -0.04
USF1-206ENST00000491629 SRFP11831 508 aa14.82□□□□□ -0.04
USF1-206ENST00000491629 IFNAR1P17181 557 aa14.82□□□□□ -0.04
USF1-206ENST00000491629 NCLP19338 710 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms