RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ARF4P18085 180 aaPredicted RBP17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 LIG1P18858 919 aa17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 ERVK-21P61565 698 aa17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 UBXN11Q5T124 520 aa17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 ARNTL2Q8WYA1 636 aa17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 SAMD11Q96NU1 681 aa17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 PANK2Q9BZ23 570 aa17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 PRDM12Q9H4Q4 367 aa17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 KMT5AQ9NQR1 393 aa17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 RNF19AQ9NV58 838 aa17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 KCNG1Q9UIX4 513 aa17.96■□□□□ 0.47
MSH5-SAPCD1-206ENST00000491552 PHLPP2Q6ZVD8 1323 aa17.96■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 ZNF623O75123 536 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 FAM13AO94988 1023 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 GIT2Q14161 759 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 RESP18Q5W5W9 173 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 SV2BQ7L1I2 683 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 SPIRE2Q8WWL2 714 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 MYLIPQ8WY64 445 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 C17orf80Q9BSJ5 609 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 SCAND2PQ9GZW5 306 aaPredicted RBP17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 TMEM117Q9H0C3 514 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 FAM13BQ9NYF5 915 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 LARSQ9P2J5 1176 aaKnown RBP17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 ARHGAP28Q9P2N2 729 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 MTUS1Q9ULD2 1270 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 RBM19Q9Y4C8 960 aaKnown RBP17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 PCDHB2Q9Y5E7 798 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 SZT2Q5T011 3432 aa17.95■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 COL4A4P53420 1690 aaPredicted RBP17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 EPOPA6NHQ4 379 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 K7ERI5 159 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 ACKR2O00590 384 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 SLC16A4O15374 487 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 TBCAO75347 108 aaKnown RBP17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 SMTNP53814 917 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 PRPF4BQ13523 1007 aaKnown RBP17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 TMEM132AQ24JP5 1023 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 CLLU1OSQ5K130 101 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 SLC27A1Q6PCB7 646 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 ABI1Q8IZP0 508 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 CNNM3Q8NE01 707 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 CLP1Q92989 425 aaKnown RBP17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 PGBD4Q96DM1 585 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 CASD1Q96PB1 797 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 GAS2L1Q99501 681 aaPredicted RBP17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 NTPCRQ9BSD7 190 aaKnown RBP17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 EIF2AQ9BY44 585 aaKnown RBP17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 TMEM134Q9H6X4 195 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 RWDD3Q9Y3V2 267 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 MRPL42Q9Y6G3 142 aaKnown RBP17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 RALGAPA2Q2PPJ7 1873 aa17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 FNDC1Q4ZHG4 1894 aaPredicted RBP17.94■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 A0A1B0GUA9 196 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 MYMKA6NI61 221 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 N4BP3O15049 544 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 EDN1P05305 212 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 LINC00271P0C7V0 271 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 ZNF131P52739 623 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 E2F4Q16254 413 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 LONRF3Q496Y0 759 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 DYMQ7RTS9 669 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 MRPL10Q7Z7H8 261 aaKnown RBP17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 CDR2LQ86X02 465 aaPredicted RBP17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 TMEM192Q8IY95 271 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 FBXO22Q8NEZ5 403 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 HELQQ8TDG4 1101 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 DDX12PQ92771 950 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 LPPQ93052 612 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 DHX58Q96C10 678 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 TRIM6Q9C030 488 aaPredicted RBP17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 CUEDC2Q9H467 287 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 ZHX3Q9H4I2 956 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 PDZD7Q9H5P4 517 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 PARVGQ9HBI0 331 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 CIZ1Q9ULV3 898 aaPredicted RBP17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 MYH11P35749 1972 aa17.93■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 NLRC5Q86WI3 1866 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 TTLL13PA6NNM8 815 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 H0YCG3 227 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 NPTXRO95502 500 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 FOSL2P15408 326 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 CTNNB1P35222 781 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 NCKAP1LP55160 1127 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 EPC2Q52LR7 807 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 ADALQ6DHV7 355 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 TAS1R3Q7RTX0 852 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 LRRC43Q8N309 656 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 MYCT1Q8N699 235 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 IQUBQ8NA54 791 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 SMG8Q8ND04 991 aaKnown RBP17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 TMEM161BQ8NDZ6 487 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 GDPD5Q8WTR4 605 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 RSPH1Q8WYR4 309 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 TNMDQ9H2S6 317 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 STXBP5LQ9Y2K9 1186 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 IPPQ9Y573 584 aa17.92■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 KIAA1671Q9BY89 1806 aa17.91■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 MEIS3P2A8K0S8 358 aa17.91■□□□□ 0.46
MSH5-SAPCD1-206ENST00000491552 RFXAPO00287 272 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms