RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 CCDC51Q96ER9 411 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 CALML4Q96GE6 196 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 CSRNP2Q9H175 543 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 C2orf40Q9H1Z8 148 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 FZD8Q9H461 694 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 PRMT7Q9NVM4 692 aaPredicted RBP20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 THEGQ9P2T0 379 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 MYH11P35749 1972 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 HIP1RO75146 1068 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 CSPG5O95196 566 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 PLA2G4BP0C869 781 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 LAG3P18627 525 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 NCLP19338 710 aaKnown RBP20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 SLC12A3P55017 1021 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 FAM187BQ17R55 369 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 SPECC1Q5M775 1068 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 FOXD4L5Q5VV16 416 aaPredicted RBP20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 PPP4R3CPQ6ZMV5 832 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 POF1BQ8WVV4 589 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 FOXD4L4Q8WXT5 416 aaPredicted RBP20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 KIFC3Q9BVG8 833 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 FBXO2Q9UK22 296 aaPredicted RBP20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 INPP5FQ9Y2H2 1132 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 IPPQ9Y573 584 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 UNC80Q8N2C7 3258 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 A0A0C4DFX4 3053 aa20.49■□□□□ 0.87
NDUFB4-204ENST00000491335 A0A1B0GUA9 196 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 TTLL13PA6NNM8 815 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 SFI1A8K8P3 1242 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 FGF18O76093 207 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 LIG1P18858 919 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 PBX3P40426 434 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 PEX3P56589 373 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 RAD51AP2Q09MP3 1159 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 MAPK7Q13164 816 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 MAPK6Q16659 721 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 TIGD5Q53EQ6 642 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 TCEAL5Q5H9L2 206 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 NOMO2Q5JPE7 1267 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 KCNT2Q6UVM3 1135 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 USP49Q70CQ1 688 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 THNSL1Q8IYQ7 743 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 CNNM3Q8NE01 707 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 LRRC15Q8TF66 581 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 PRIMPOLQ96LW4 560 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 CLIC6Q96NY7 704 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 MRPL9Q9BYD2 267 aaKnown RBP20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 CCDC113Q9H0I3 377 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 RNF39Q9H2S5 420 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 RSAD1Q9HA92 442 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 USP20Q9Y2K6 914 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 HES2Q9Y543 173 aa20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 SRPRBQ9Y5M8 271 aaKnown RBP20.48■□□□□ 0.87
NDUFB4-204ENST00000491335 MYH15Q9Y2K3 1946 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 CCDC169A6NNP5 214 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 PRKCBP05771 671 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 ITGA4P13612 1032 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 PDIA4P13667 645 aaKnown RBP20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 PLCG1P19174 1290 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 GUCY2CP25092 1073 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 AFF1P51825 1210 aaKnown RBP20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 TFF2Q03403 129 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 SLC39A14Q15043 492 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 KARSQ15046 597 aaKnown RBP20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 CSPP1Q1MSJ5 1256 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 ATXN2LQ8WWM7 1075 aaKnown RBP20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 EPSTI1Q96J88 318 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 DRC1Q96MC2 740 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 ZNF558Q96NG5 402 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 CCSER1Q9C0I3 900 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 NSUN3Q9H649 340 aaKnown RBP20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 TBC1D13Q9NVG8 400 aa20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 TFIP11Q9UBB9 837 aaKnown RBP20.47■□□□□ 0.87
NDUFB4-204ENST00000491335 ACKR2O00590 384 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 NPTXRO95502 500 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 EDN1P05305 212 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 ZSCAN22P10073 491 aaPredicted RBP20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 IRS1P35568 1242 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 NPTX2P47972 431 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 EFNA5P52803 228 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 PRPF4BQ13523 1007 aaKnown RBP20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 DHX8Q14562 1220 aaKnown RBP20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 ARSHQ5FYA8 562 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 SLC27A1Q6PCB7 646 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 RASSF8Q8NHQ8 419 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 RSPH1Q8WYR4 309 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 HLA-CQ95604 372 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 TIPINQ9BVW5 301 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 APOL6Q9BWW8 343 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 TRIM6Q9C030 488 aaPredicted RBP20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 NRDE2Q9H7Z3 1164 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 BLOC1S4Q9NUP1 217 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 COG5Q9UP83 839 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 CNTNAP2Q9UHC6 1331 aa20.46■□□□□ 0.87
NDUFB4-204ENST00000491335 NPHP3-ACAD11A0A0J9YXS1 232 aa20.45■□□□□ 0.86
NDUFB4-204ENST00000491335 K7ERI5 159 aa20.45■□□□□ 0.86
NDUFB4-204ENST00000491335 NASPP49321 788 aaPredicted RBP20.45■□□□□ 0.86
NDUFB4-204ENST00000491335 BCAR1P56945 870 aa20.45■□□□□ 0.86
NDUFB4-204ENST00000491335 MRPS5P82675 430 aaKnown RBP20.45■□□□□ 0.86
NDUFB4-204ENST00000491335 UBE3AQ05086 875 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms