RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ALG3Q92685 438 aa20.84■□□□□ 0.93
SNAPC3-206ENST00000490969 POTEB3A0JP26 581 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 POTECB2RU33 542 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 O00370 1275 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 EVI5O60447 810 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 PHF2O75151 1096 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 AKAP3O75969 853 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 GJB6O95452 261 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 VCAM1P19320 739 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 CCNG1P51959 295 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 INHBEP58166 350 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 POTEBQ6S5H4 581 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 KIAA0825Q8IV33 1275 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 SH3GL3Q99963 347 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 PARP2Q9UGN5 583 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 ARL2BPQ9Y2Y0 163 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 C10orf71Q711Q0 1435 aa20.83■□□□□ 0.93
SNAPC3-206ENST00000490969 USP17L5A8MUK1 530 aa20.83■□□□□ 0.92
SNAPC3-206ENST00000490969 LUC7L3O95232 432 aaKnown RBP20.83■□□□□ 0.92
SNAPC3-206ENST00000490969 LMNB1P20700 586 aa20.83■□□□□ 0.92
SNAPC3-206ENST00000490969 STAT1P42224 750 aa20.83■□□□□ 0.92
SNAPC3-206ENST00000490969 BIRC2Q13490 618 aa20.83■□□□□ 0.92
SNAPC3-206ENST00000490969 PICALMQ13492 652 aa20.83■□□□□ 0.92
SNAPC3-206ENST00000490969 NUGGCQ68CJ6 796 aa20.83■□□□□ 0.92
SNAPC3-206ENST00000490969 FITM2Q8N6M3 262 aa20.83■□□□□ 0.92
SNAPC3-206ENST00000490969 RARGP13631 454 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 CHRNA3P32297 505 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 ABL2P42684 1182 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 KNOP1Q1ED39 458 aaKnown RBP20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 SPATA21Q7Z572 469 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 PLCD4Q9BRC7 762 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 RXFP1Q9HBX9 757 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 TMOD4Q9NZQ9 345 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 TRIM33Q9UPN9 1127 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 ENO4A6NNW6 628 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 ARSHQ5FYA8 562 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 AADACL2Q6P093 401 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 EGFL6Q8IUX8 553 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 NEDD1Q8NHV4 660 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 SLC35C1Q96A29 364 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 ZNF287Q9HBT7 754 aa20.82■□□□□ 0.92
SNAPC3-206ENST00000490969 YDJCA8MPS7 323 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 PODXLO00592 558 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 UBE2SQ16763 222 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 PRELID2Q8N945 189 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 ARHGEF26Q96DR7 871 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 PCDHA3Q9Y5H8 950 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 FRMPD2Q68DX3 1309 aaPredicted RBP20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 PITPNM2Q9BZ72 1349 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 TMEM120BA0PK00 339 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 A6NHS1 94 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 HOXD13P35453 343 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 CACNB3P54284 484 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 APOBEC3HQ6NTF7 200 aaKnown RBP20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 OTUD6AQ7L8S5 288 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 FAM167BQ9BTA0 163 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 ARHGEF10LQ9HCE6 1279 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 PCYOX1Q9UHG3 505 aa20.81■□□□□ 0.92
SNAPC3-206ENST00000490969 CALUO43852 315 aaPredicted RBP20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 PLCG2P16885 1265 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 SOX5P35711 763 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 CDK8P49336 464 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 TAF11Q15544 211 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 PODNQ7Z5L7 613 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 CEP95Q96GE4 821 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 UIMC1Q96RL1 719 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 ROPN1BQ9BZX4 212 aaPredicted RBP20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 ROPN1Q9HAT0 212 aaPredicted RBP20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 METTL14Q9HCE5 456 aaKnown RBP20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 SYNGAP1Q96PV0 1343 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 ZNF646O15015 1829 aaPredicted RBP20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 FAM170AA1A519 330 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 LINGO3P0C6S8 592 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 NFIAQ12857 509 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 DACT2Q5SW24 774 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 TTC27Q6P3X3 843 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 ZFPM1Q8IX07 1006 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 ARHGEF2Q92974 986 aaKnown RBP20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 RUNDC3BQ96NL0 473 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 YIPF3Q9GZM5 350 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 PRKAG3Q9UGI9 489 aa20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 DDX60LQ5H9U9 1706 aaKnown RBP20.8■□□□□ 0.92
SNAPC3-206ENST00000490969 PDXKO00764 312 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 WFS1O76024 890 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 HSPA6P17066 643 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 CASP4P49662 377 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 SLC12A3P55017 1021 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 LONRF1Q17RB8 773 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 VSTM1Q6UX27 236 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 KCNV2Q8TDN2 545 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 NAF1Q96HR8 494 aaKnown RBP20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 RMDN2Q96LZ7 410 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 ANKRD27Q96NW4 1050 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 DHX36Q9H2U1 1008 aaKnown RBP20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 ZFATQ9P243 1243 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 COG5Q9UP83 839 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 COL4A5P29400 1685 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 GTPBP10A4D1E9 387 aaKnown RBP20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 NR3C1P04150 777 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms