RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ZC3H11AO75152 810 aaKnown RBP eCLIP34.81■■■■□ 3.16
LDB1-204ENST00000490751 AXLP30530 894 aa34.81■■■■□ 3.16
LDB1-204ENST00000490751 CCT6AP40227 531 aaKnown RBP34.81■■■■□ 3.16
LDB1-204ENST00000490751 ALDH7A1P49419 539 aaKnown RBP34.81■■■■□ 3.16
LDB1-204ENST00000490751 CPB2Q96IY4 423 aa34.81■■■■□ 3.16
LDB1-204ENST00000490751 NFKBIZQ9BYH8 718 aa34.81■■■■□ 3.16
LDB1-204ENST00000490751 CD320Q9NPF0 282 aa34.81■■■■□ 3.16
LDB1-204ENST00000490751 ARHGEF35A5YM69 484 aa34.8■■■■□ 3.16
LDB1-204ENST00000490751 MUTP22033 750 aa34.8■■■■□ 3.16
LDB1-204ENST00000490751 NCBP1Q09161 790 aaKnown RBP34.8■■■■□ 3.16
LDB1-204ENST00000490751 NOTUMQ6P988 496 aa34.8■■■■□ 3.16
LDB1-204ENST00000490751 CCDC51Q96ER9 411 aa34.8■■■■□ 3.16
LDB1-204ENST00000490751 NRDE2Q9H7Z3 1164 aa34.8■■■■□ 3.16
LDB1-204ENST00000490751 RSAD1Q9HA92 442 aa34.8■■■■□ 3.16
LDB1-204ENST00000490751 CD207Q9UJ71 328 aa34.8■■■■□ 3.16
LDB1-204ENST00000490751 GLP2RO95838 553 aa34.79■■■■□ 3.16
LDB1-204ENST00000490751 NCLP19338 710 aaKnown RBP34.79■■■■□ 3.16
LDB1-204ENST00000490751 RNASELQ05823 741 aaKnown RBP34.79■■■■□ 3.16
LDB1-204ENST00000490751 ECM1Q16610 540 aa34.79■■■■□ 3.16
LDB1-204ENST00000490751 AMHR2Q16671 573 aa34.79■■■■□ 3.16
LDB1-204ENST00000490751 DUSP6Q16828 381 aa34.79■■■■□ 3.16
LDB1-204ENST00000490751 PADI6Q6TGC4 694 aa34.79■■■■□ 3.16
LDB1-204ENST00000490751 URGCPQ8TCY9 931 aa34.79■■■■□ 3.16
LDB1-204ENST00000490751 CNTNAP2Q9UHC6 1331 aa34.79■■■■□ 3.16
LDB1-204ENST00000490751 LRRIQ4A6NIV6 560 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 H3BQV1 296 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 MBTPS2O43462 519 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 SMAD4Q13485 552 aaKnown RBP34.78■■■■□ 3.16
LDB1-204ENST00000490751 TMC7Q7Z402 723 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 IGSF22Q8N9C0 903 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 SMG8Q8ND04 991 aaKnown RBP34.78■■■■□ 3.16
LDB1-204ENST00000490751 CNNM3Q8NE01 707 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 TMEM169Q96HH4 297 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 MSLNLQ96KJ4 702 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 CDCA3Q99618 268 aaPredicted RBP34.78■■■■□ 3.16
LDB1-204ENST00000490751 EIF2AQ9BY44 585 aaKnown RBP34.78■■■■□ 3.16
LDB1-204ENST00000490751 RAB34Q9BZG1 259 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 GBP3Q9H0R5 595 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 NGRNQ9NPE2 291 aaKnown RBP34.78■■■■□ 3.16
LDB1-204ENST00000490751 EIF4ENIF1Q9NRA8 985 aaKnown RBP34.78■■■■□ 3.16
LDB1-204ENST00000490751 CLEC1BQ9P126 229 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 SMC3Q9UQE7 1217 aa34.78■■■■□ 3.16
LDB1-204ENST00000490751 LAD1O00515 517 aa34.77■■■■□ 3.16
LDB1-204ENST00000490751 ARF4P18085 180 aaPredicted RBP34.77■■■■□ 3.16
LDB1-204ENST00000490751 PDIA5Q14554 519 aa34.77■■■■□ 3.16
LDB1-204ENST00000490751 TMEM173Q86WV6 379 aaPredicted RBP34.77■■■■□ 3.16
LDB1-204ENST00000490751 GJD3Q8N144 294 aa34.77■■■■□ 3.16
LDB1-204ENST00000490751 SNX29Q8TEQ0 813 aa34.77■■■■□ 3.16
LDB1-204ENST00000490751 CSRNP2Q9H175 543 aa34.77■■■■□ 3.16
LDB1-204ENST00000490751 BARX2Q9UMQ3 279 aaPredicted RBP34.77■■■■□ 3.16
LDB1-204ENST00000490751 IPPQ9Y573 584 aa34.77■■■■□ 3.16
LDB1-204ENST00000490751 ITGA4P13612 1032 aa34.76■■■■□ 3.16
LDB1-204ENST00000490751 CYP11B2P19099 503 aa34.76■■■■□ 3.16
LDB1-204ENST00000490751 RILPL1Q5EBL4 403 aa34.76■■■■□ 3.16
LDB1-204ENST00000490751 DNAJB4Q9UDY4 337 aa34.76■■■■□ 3.16
LDB1-204ENST00000490751 STK24Q9Y6E0 443 aa34.76■■■■□ 3.16
LDB1-204ENST00000490751 FSD2A1L4K1 749 aa34.75■■■■□ 3.15
LDB1-204ENST00000490751 CARNS1A5YM72 827 aa34.75■■■■□ 3.15
LDB1-204ENST00000490751 HIDE1A8MVS5 230 aa34.75■■■■□ 3.15
LDB1-204ENST00000490751 B4GALT5O43286 388 aa34.75■■■■□ 3.15
LDB1-204ENST00000490751 GALTP07902 379 aa34.75■■■■□ 3.15
LDB1-204ENST00000490751 SSTR3P32745 418 aaPredicted RBP34.75■■■■□ 3.15
LDB1-204ENST00000490751 PRPHP41219 470 aa34.75■■■■□ 3.15
LDB1-204ENST00000490751 AFF1P51825 1210 aaKnown RBP34.75■■■■□ 3.15
LDB1-204ENST00000490751 SMAD2Q15796 467 aaKnown RBP34.75■■■■□ 3.15
LDB1-204ENST00000490751 ZNF280BQ86YH2 543 aa34.75■■■■□ 3.15
LDB1-204ENST00000490751 KIAA1024Q9UPX6 916 aa34.75■■■■□ 3.15
LDB1-204ENST00000490751 ZSCAN21Q9Y5A6 473 aaPredicted RBP34.75■■■■□ 3.15
LDB1-204ENST00000490751 B4GALT3O60512 393 aa34.74■■■■□ 3.15
LDB1-204ENST00000490751 RBM10P98175 930 aaKnown RBP34.74■■■■□ 3.15
LDB1-204ENST00000490751 IL17AQ16552 155 aa34.74■■■■□ 3.15
LDB1-204ENST00000490751 VN1R2Q8NFZ6 395 aa34.74■■■■□ 3.15
LDB1-204ENST00000490751 BSNDQ8WZ55 320 aa34.74■■■■□ 3.15
LDB1-204ENST00000490751 BHMT2Q9H2M3 363 aa34.74■■■■□ 3.15
LDB1-204ENST00000490751 UBN1Q9NPG3 1134 aa34.74■■■■□ 3.15
LDB1-204ENST00000490751 DDX19AQ9NUU7 478 aaKnown RBP34.74■■■■□ 3.15
LDB1-204ENST00000490751 PRKAG3Q9UGI9 489 aa34.74■■■■□ 3.15
LDB1-204ENST00000490751 PP2D1A8MPX8 630 aa34.73■■■■□ 3.15
LDB1-204ENST00000490751 SLC11A1P49279 550 aa34.73■■■■□ 3.15
LDB1-204ENST00000490751 SMC1AQ14683 1233 aaKnown RBP34.73■■■■□ 3.15
LDB1-204ENST00000490751 CDCA2Q69YH5 1023 aaPredicted RBP34.73■■■■□ 3.15
LDB1-204ENST00000490751 DTHD1Q6ZMT9 781 aa34.73■■■■□ 3.15
LDB1-204ENST00000490751 ZBTB8OSQ8IWT0 167 aa34.73■■■■□ 3.15
LDB1-204ENST00000490751 KHSRPQ92945 711 aaKnown RBP eCLIP34.73■■■■□ 3.15
LDB1-204ENST00000490751 IGSF21Q96ID5 467 aa34.73■■■■□ 3.15
LDB1-204ENST00000490751 TRIM6Q9C030 488 aaPredicted RBP34.73■■■■□ 3.15
LDB1-204ENST00000490751 RNF39Q9H2S5 420 aa34.73■■■■□ 3.15
LDB1-204ENST00000490751 KANSL3Q9P2N6 904 aa34.73■■■■□ 3.15
LDB1-204ENST00000490751 HES2Q9Y543 173 aa34.73■■■■□ 3.15
LDB1-204ENST00000490751 DDHD2O94830 711 aa34.72■■■■□ 3.15
LDB1-204ENST00000490751 POMCP01189 267 aa34.72■■■■□ 3.15
LDB1-204ENST00000490751 ZP2Q05996 745 aa34.72■■■■□ 3.15
LDB1-204ENST00000490751 COASYQ13057 564 aa34.72■■■■□ 3.15
LDB1-204ENST00000490751 CDR2LQ86X02 465 aaPredicted RBP34.72■■■■□ 3.15
LDB1-204ENST00000490751 SMRP1Q8NCR6 262 aa34.72■■■■□ 3.15
LDB1-204ENST00000490751 BCL7CQ8WUZ0 217 aaPredicted RBP34.72■■■■□ 3.15
LDB1-204ENST00000490751 PRMT7Q9NVM4 692 aaPredicted RBP34.72■■■■□ 3.15
LDB1-204ENST00000490751 EYA4O95677 639 aa34.71■■■■□ 3.15
LDB1-204ENST00000490751 KRT79Q5XKE5 535 aa34.71■■■■□ 3.15
LDB1-204ENST00000490751 PPP4R3CPQ6ZMV5 832 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms