RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MAGEB2O15479 319 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 GAS2O43903 313 aaKnown RBP15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 ALDH2P05091 517 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 NCLP19338 710 aaKnown RBP15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 TMOD1P28289 359 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 NRLP54845 237 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 NTHL1P78549 312 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 CEP55Q53EZ4 464 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 GLYCTKQ8IVS8 523 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 HDAC7Q8WUI4 952 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 NLRP7Q8WX94 980 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 NELL2Q99435 816 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 PLEKHA4Q9H4M7 779 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 RXFP1Q9HBX9 757 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 CHST12Q9NRB3 414 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 ZDHHC7Q9NXF8 308 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 CDH7Q9ULB5 785 aa15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 MAFBQ9Y5Q3 323 aaPredicted RBP15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 GCN1Q92616 2671 aaKnown RBP15.51■□□□□ 0.07
EXOSC3-207ENST00000490516 hCG_1642624A0A1W2PR95 340 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 ERICH2A1L162 156 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 SHISA7A6NL88 538 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 TGM5O43548 720 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 PLEKHA8P1O95397 391 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 GLUD2P49448 558 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 PFKPQ01813 784 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 SRSF5Q13243 272 aaKnown RBP15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 SIM2Q14190 667 aaPredicted RBP15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 MTSS1LQ765P7 747 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 GRASPQ7Z6J2 395 aaPredicted RBP15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 CATIPQ7Z7H3 387 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 CMTR1Q8N1G2 835 aaKnown RBP15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 MAP4K1Q92918 833 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 TRAIPQ9BWF2 469 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 LY9Q9HBG7 655 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 FAM105AQ9NUU6 356 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 MARCH5Q9NX47 278 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 ZBTB47Q9UFB7 747 aaPredicted RBP15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 SSX2IPQ9Y2D8 614 aa15.5■□□□□ 0.07
EXOSC3-207ENST00000490516 NBEAQ8NFP9 2946 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 MEIS1O00470 390 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 DHX15O43143 795 aaKnown RBP15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 ADCY1Q08828 1119 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 AASDHQ4L235 1098 aaPredicted RBP15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 LRSAM1Q6UWE0 723 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 ZNF852Q6ZMS4 543 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 SRBD1Q8N5C6 995 aaKnown RBP15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 KDF1Q8NAX2 398 aaPredicted RBP15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 URGCPQ8TCY9 931 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 FGF13Q92913 245 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 B3GALT6Q96L58 329 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 FAM193BQ96PV7 902 aaPredicted RBP15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 TMEM175Q9BSA9 504 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 HEBP1Q9NRV9 189 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 CEP131Q9UPN4 1083 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 PIN4Q9Y237 131 aaKnown RBP15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 PRG3Q9Y2Y8 225 aaPredicted RBP15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 NOTCH4Q99466 2003 aa15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 TDRD15B5MCY1 1934 aaKnown RBP15.49■□□□□ 0.07
EXOSC3-207ENST00000490516 WDFY3Q8IZQ1 3526 aa15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 HRO43593 1189 aa15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 POMCP01189 267 aa15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 SKIP12755 728 aa15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 TRDNQ13061 729 aa15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 AGMOQ6ZNB7 445 aa15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 RNF168Q8IYW5 571 aaPredicted RBP15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 ZNF710Q8N1W2 664 aa15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 PHF20Q9BVI0 1012 aa15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 RXFP3Q9NSD7 469 aa15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 NDRG2Q9UN36 371 aaKnown RBP15.48■□□□□ 0.07
EXOSC3-207ENST00000490516 F8W810 466 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 ZNF623O75123 536 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 ZMYND10O75800 440 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 KCNK5O95279 499 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 EFEMP2O95967 443 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 SMARCA1P28370 1054 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 LIMK1P53667 647 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 DSG1Q02413 1049 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 RING1Q06587 406 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 DRP2Q13474 957 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 SF3A2Q15428 464 aaKnown RBP15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 LILRA6Q6PI73 481 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 ZNF687Q8N1G0 1237 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 CTCFLQ8NI51 663 aaPredicted RBP15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 ITFG1Q8TB96 612 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 GCOM2Q9BZD3 368 aaPredicted RBP15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 CHRDQ9H2X0 955 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 DIAPH3Q9NSV4 1193 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 GABBR1Q9UBS5 961 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 RCAN3Q9UKA8 241 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 LHX6Q9UPM6 363 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 MRPS17Q9Y2R5 130 aaKnown RBP15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 SDK1Q7Z5N4 2213 aa15.47■□□□□ 0.07
EXOSC3-207ENST00000490516 SRRM3A6NNA2 597 aaPredicted RBP15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 CHURC1-FNTBB4DL54 471 aa15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 ZIC2O95409 532 aaPredicted RBP15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 RPL17P18621 184 aaKnown RBP15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 OR1G1P47890 313 aa15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 FNTBP49356 437 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms