RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CATSPER3Q86XQ3 398 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 CCDC83Q8IWF9 413 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 THNSL1Q8IYQ7 743 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 ABI1Q8IZP0 508 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 RNF149Q8NC42 400 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 HELQQ8TDG4 1101 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 SUSD6Q92537 303 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 C8orf76Q96K31 380 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 POLR3CQ9BUI4 534 aaPredicted RBP10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 MFRPQ9BY79 579 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 S1PR5Q9H228 398 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 IGFLR1Q9H665 355 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 TUFT1Q9NNX1 390 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 TBC1D13Q9NVG8 400 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 DBR1Q9UK59 544 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 PIN4Q9Y237 131 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 PCDHB2Q9Y5E7 798 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 IRAK3Q9Y616 596 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 GALTP07902 379 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 NCLP19338 710 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 IBSPP21815 317 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 AXLP30530 894 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 ALDH7A1P49419 539 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 AFF1P51825 1210 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 BCAR1P56945 870 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 GUCY1B3Q02153 619 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 KRT17Q04695 432 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 CBX2Q14781 532 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 NOMO2Q5JPE7 1267 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 SPOUT1Q5T280 376 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 TWF2Q6IBS0 349 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 GLB1LQ6UWU2 654 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 ASAP3Q8TDY4 903 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 LPPQ93052 612 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 PGBD4Q96DM1 585 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 CCDC51Q96ER9 411 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 MTRQ99707 1265 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 LRFN3Q9BTN0 628 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 NRDE2Q9H7Z3 1164 aa10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 ARIH1Q9Y4X5 557 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-210ENST00000490099 C2orf71A6NGG8 1288 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 POTEMA6NI47 508 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 HIDE1A8MVS5 230 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 PER2O15055 1255 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 B4GALT3O60512 393 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 TSPAN1O60635 241 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 MED24O75448 989 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 EFEMP2O95967 443 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 C7P10643 843 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 COL9A1P20849 921 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 MUTP22033 750 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 GLRA2P23416 452 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 RPA1P27694 616 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 MCM7P33993 719 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 PBX3P40426 434 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 NDUFV1P49821 464 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 TOB1P50616 345 aaPredicted RBP10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 RBM10P98175 930 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 MBTD1Q05BQ5 628 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 PDIA5Q14554 519 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 SYCE2Q6PIF2 218 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 DDX53Q86TM3 631 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 RBM23Q86U06 439 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 TMEM173Q86WV6 379 aaPredicted RBP10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 NOSTRINQ8IVI9 506 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 RNF169Q8NCN4 708 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 SMG8Q8ND04 991 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 CNNM3Q8NE01 707 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 MICAL1Q8TDZ2 1067 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 PIGOQ8TEQ8 1089 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 IGSF21Q96ID5 467 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 TCF25Q9BQ70 676 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 KANSL3Q9P2N6 904 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 CNTNAP2Q9UHC6 1331 aa10.82□□□□□ -0.68
TMEM39A-210ENST00000490099 A0A087WWV3 80 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 A0A1B0GUA9 196 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 LOC730098B7Z3J9 87 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 LILRB3O75022 631 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 DDHD2O94830 711 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 OR52Z1P0C646 297 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 CTSAP10619 480 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 ALADP13716 330 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 HOXB8P17481 243 aaPredicted RBP10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 FOSBP53539 338 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 CAPSQ13938 189 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 TFDP1Q14186 410 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 RABEP1Q15276 862 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 ZNF174Q15697 407 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 CLUL1Q15846 466 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 FAM187BQ17R55 369 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 TMEM31Q5JXX7 168 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 EP400NLQ6ZTU2 488 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 ZNF280BQ86YH2 543 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 BCL7CQ8WUZ0 217 aaPredicted RBP10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 NACC1Q96RE7 527 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 POP1Q99575 1024 aaKnown RBP10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 TMEM175Q9BSA9 504 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 VN1R3Q9BXE9 311 aa10.81□□□□□ -0.68
TMEM39A-210ENST00000490099 CSRNP2Q9H175 543 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms