RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 APEX2Q9UBZ4 518 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 GCOM1H8Y6P7 765 aaPredicted RBP14.35□□□□□ -0.11
TNXB-206ENST00000490077 PLSCR1O15162 318 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 DHX15O43143 795 aaKnown RBP14.35□□□□□ -0.11
TNXB-206ENST00000490077 ERLIN2O94905 339 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 POLR2MP0CAP2 368 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 IFNAR2P48551 515 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 MMP14P50281 582 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 LRRC14Q15048 493 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 PPM1KQ8N3J5 372 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 TAAR1Q96RJ0 339 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 JPH2Q9BR39 696 aaPredicted RBP14.35□□□□□ -0.11
TNXB-206ENST00000490077 STK33Q9BYT3 514 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 EPN3Q9H201 632 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 DMAC2Q9NW81 257 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 DDX20Q9UHI6 824 aaKnown RBP14.35□□□□□ -0.11
TNXB-206ENST00000490077 AMFRQ9UKV5 643 aa14.35□□□□□ -0.11
TNXB-206ENST00000490077 FNTAP49354 379 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 BFSP1Q12934 665 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 SLC29A2Q14542 456 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 HP1BP3Q5SSJ5 553 aaPredicted RBP14.34□□□□□ -0.11
TNXB-206ENST00000490077 GMCL1P1Q8NEA9 526 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 OSBPL7Q9BZF2 842 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 NUCKS1Q9H1E3 243 aaKnown RBP14.34□□□□□ -0.11
TNXB-206ENST00000490077 OLFML3Q9NRN5 406 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 RIPK3Q9Y572 518 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 COL4A5P29400 1685 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 ZNF536O15090 1300 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 ALAS1P13196 640 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 VCAM1P19320 739 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 RXRBP28702 533 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 HNRNPH1P31943 449 aaKnown RBP14.34□□□□□ -0.11
TNXB-206ENST00000490077 GLE1Q53GS7 698 aaKnown RBP14.34□□□□□ -0.11
TNXB-206ENST00000490077 SPOPLQ6IQ16 392 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 ZDHHC18Q9NUE0 388 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 CNTNAP1P78357 1384 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 ARHGEF35A5YM69 484 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 CCNE2O96020 404 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 MYZAPP0CAP1 466 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 RASGEF1CQ8N431 466 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 MGARPQ8TDB4 240 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 IQCDQ96DY2 449 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 CYFIP2Q96F07 1278 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 AGPAT1Q99943 283 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 TMEM117Q9H0C3 514 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 KLHL11Q9NVR0 708 aa14.34□□□□□ -0.11
TNXB-206ENST00000490077 SUCLA2Q9P2R7 463 aaPredicted RBP14.34□□□□□ -0.11
TNXB-206ENST00000490077 BHMG1C9JSJ3 638 aaPredicted RBP14.33□□□□□ -0.12
TNXB-206ENST00000490077 TP73O15350 636 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 RPL13P26373 211 aaKnown RBP14.33□□□□□ -0.12
TNXB-206ENST00000490077 ACTN3Q08043 901 aaPredicted RBP14.33□□□□□ -0.12
TNXB-206ENST00000490077 TAS1R2Q8TE23 839 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 CTNNBL1Q8WYA6 563 aaPredicted RBP14.33□□□□□ -0.12
TNXB-206ENST00000490077 HEMGNQ9BXL5 484 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 ADAM7Q9H2U9 754 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 AZI2Q9H6S1 392 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 GRHL1Q9NZI5 618 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 TSKSQ9UJT2 592 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 FRMPD4Q14CM0 1322 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 CLDN3O15551 220 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 DLATP10515 647 aaKnown RBP14.33□□□□□ -0.12
TNXB-206ENST00000490077 ALDH1B1P30837 517 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 DR1Q01658 176 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 FSTL1Q12841 308 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 JAMLQ86YT9 394 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 MREGQ8N565 214 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 RFFLQ8WZ73 363 aa14.33□□□□□ -0.12
TNXB-206ENST00000490077 ADGRA3Q8IWK6 1321 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 RPTORQ8N122 1335 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 VIL1P09327 827 aaKnown RBP14.32□□□□□ -0.12
TNXB-206ENST00000490077 TCF4P15884 667 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 PPP2R5CQ13362 524 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 PASD1Q8IV76 773 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 WHAMMQ8TF30 809 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 ACSF2Q96CM8 615 aaPredicted RBP14.32□□□□□ -0.12
TNXB-206ENST00000490077 ZNF341Q9BYN7 854 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 HSPBP1Q9NZL4 362 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 ZNF70Q9UC06 446 aaPredicted RBP14.32□□□□□ -0.12
TNXB-206ENST00000490077 FRMD4BQ9Y2L6 1034 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 SUGT1Q9Y2Z0 365 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 KIAA0391O15091 583 aaKnown RBP14.32□□□□□ -0.12
TNXB-206ENST00000490077 TBX3O15119 743 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 RARAP10276 462 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 CHKAP35790 457 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 PTGIRP43119 386 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 SF3B2Q13435 895 aaKnown RBP14.32□□□□□ -0.12
TNXB-206ENST00000490077 FAM102BQ5T8I3 360 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 BTNL9Q6UXG8 535 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 NLGN1Q8N2Q7 840 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 C7orf43Q8WVR3 580 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 CPA5Q8WXQ8 436 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 THOC1Q96FV9 657 aaKnown RBP14.32□□□□□ -0.12
TNXB-206ENST00000490077 PBKQ96KB5 322 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 CCDC113Q9H0I3 377 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 R3HDM2Q9Y2K5 976 aaKnown RBP14.32□□□□□ -0.12
TNXB-206ENST00000490077 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
TNXB-206ENST00000490077 A0A087WUV0 522 aaPredicted RBP14.31□□□□□ -0.12
TNXB-206ENST00000490077 SPDYE2BA6NHP3 402 aa14.31□□□□□ -0.12
TNXB-206ENST00000490077 CCDC169A6NNP5 214 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms