RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 HOXA11P31270 313 aaPredicted RBP16.81■□□□□ 0.28
FAM3D-204ENST00000489857 CLCN5P51795 746 aa16.81■□□□□ 0.28
FAM3D-204ENST00000489857 NONOQ15233 471 aaKnown RBP eCLIP16.81■□□□□ 0.28
FAM3D-204ENST00000489857 INF2Q27J81 1249 aa16.81■□□□□ 0.28
FAM3D-204ENST00000489857 CCDC149Q6ZUS6 474 aa16.81■□□□□ 0.28
FAM3D-204ENST00000489857 OTOP3Q7RTS5 596 aa16.81■□□□□ 0.28
FAM3D-204ENST00000489857 PRPF31Q8WWY3 499 aaKnown RBP16.81■□□□□ 0.28
FAM3D-204ENST00000489857 TMEM143Q96AN5 459 aa16.81■□□□□ 0.28
FAM3D-204ENST00000489857 ACSF2Q96CM8 615 aaPredicted RBP16.81■□□□□ 0.28
FAM3D-204ENST00000489857 EMILIN2Q9BXX0 1053 aa16.81■□□□□ 0.28
FAM3D-204ENST00000489857 CFAP54Q96N23 3096 aa16.81■□□□□ 0.28
FAM3D-204ENST00000489857 RIF1Q5UIP0 2472 aaKnown RBP16.8■□□□□ 0.28
FAM3D-204ENST00000489857 SPDYE4A6NLX3 237 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 NRP1O14786 923 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 PI15O43692 258 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 DEXIO95424 95 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 NPR3P17342 541 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 QARSP47897 775 aaKnown RBP16.8■□□□□ 0.28
FAM3D-204ENST00000489857 PPP2R5CQ13362 524 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 FRMD5Q7Z6J6 570 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 FLCNQ8NFG4 579 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 SLC7A3Q8WY07 619 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 CEP170P1Q96L14 293 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 TMEM175Q9BSA9 504 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 DHX33Q9H6R0 707 aaKnown RBP16.8■□□□□ 0.28
FAM3D-204ENST00000489857 KCNMB3Q9NPA1 279 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 BMP2KQ9NSY1 1161 aaPredicted RBP16.8■□□□□ 0.28
FAM3D-204ENST00000489857 STK39Q9UEW8 545 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
FAM3D-204ENST00000489857 CNTNAP2Q9UHC6 1331 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 MYO15AQ9UKN7 3530 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 POMCP01189 267 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 ALDH2P05091 517 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 SRGAP2CP0DJJ0 459 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 LAMTOR4Q0VGL1 99 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 TDGQ13569 410 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 LETM2Q2VYF4 491 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 C15orf39Q6ZRI6 1047 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 RUFY3Q7L099 469 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 TAS1R1Q7RTX1 841 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 KRT25Q7Z3Z0 450 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 SRGAP1Q7Z6B7 1085 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 SMG8Q8ND04 991 aaKnown RBP16.79■□□□□ 0.28
FAM3D-204ENST00000489857 PSPC1Q8WXF1 523 aaKnown RBP16.79■□□□□ 0.28
FAM3D-204ENST00000489857 LARP6Q9BRS8 491 aaKnown RBP16.79■□□□□ 0.28
FAM3D-204ENST00000489857 KCNK12Q9HB15 430 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 MRPL17Q9NRX2 175 aaKnown RBP16.79■□□□□ 0.28
FAM3D-204ENST00000489857 MARCH5Q9NX47 278 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 KANSL3Q9P2N6 904 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 SPTBN4Q9H254 2564 aa16.79■□□□□ 0.28
FAM3D-204ENST00000489857 C2CD2LO14523 706 aa16.78■□□□□ 0.28
FAM3D-204ENST00000489857 CPLX1O14810 134 aa16.78■□□□□ 0.28
FAM3D-204ENST00000489857 N4BP1O75113 896 aaKnown RBP16.78■□□□□ 0.28
FAM3D-204ENST00000489857 SOD2P04179 222 aa16.78■□□□□ 0.28
FAM3D-204ENST00000489857 NCLP19338 710 aaKnown RBP16.78■□□□□ 0.28
FAM3D-204ENST00000489857 AOC1P19801 751 aa16.78■□□□□ 0.28
FAM3D-204ENST00000489857 GALNT17Q6IS24 598 aa16.78■□□□□ 0.28
FAM3D-204ENST00000489857 CMASQ8NFW8 434 aaPredicted RBP16.78■□□□□ 0.28
FAM3D-204ENST00000489857 FAM193BQ96PV7 902 aaPredicted RBP16.78■□□□□ 0.28
FAM3D-204ENST00000489857 HERC2P3Q9BVR0 1158 aa16.78■□□□□ 0.28
FAM3D-204ENST00000489857 ZSWIM6Q9HCJ5 1215 aa16.78■□□□□ 0.28
FAM3D-204ENST00000489857 MAN1C1Q9NR34 630 aa16.78■□□□□ 0.28
FAM3D-204ENST00000489857 DUSP12Q9UNI6 340 aa16.78■□□□□ 0.28
FAM3D-204ENST00000489857 KCNJ14Q9UNX9 436 aa16.78■□□□□ 0.28
FAM3D-204ENST00000489857 PRG3Q9Y2Y8 225 aaPredicted RBP16.78■□□□□ 0.28
FAM3D-204ENST00000489857 FAM186AA6NE01 2351 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 EFEMP2O95967 443 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 URODP06132 367 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 P4HBP07237 508 aaKnown RBP16.77■□□□□ 0.28
FAM3D-204ENST00000489857 RFC5P40937 340 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 AK2P54819 239 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 CCDC105Q8IYK2 499 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 COLGALT2Q8IYK4 626 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 RNF168Q8IYW5 571 aaPredicted RBP16.77■□□□□ 0.28
FAM3D-204ENST00000489857 FAM177A1Q8N128 213 aaPredicted RBP16.77■□□□□ 0.28
FAM3D-204ENST00000489857 SIX5Q8N196 739 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 HAS1Q92839 578 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 ZNF274Q96GC6 653 aaPredicted RBP16.77■□□□□ 0.28
FAM3D-204ENST00000489857 FAM20AQ96MK3 541 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 RPS6KC1Q96S38 1066 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 LXNQ9BS40 222 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 EIF2AQ9BY44 585 aaKnown RBP16.77■□□□□ 0.28
FAM3D-204ENST00000489857 SLKQ9H2G2 1235 aaPredicted RBP16.77■□□□□ 0.28
FAM3D-204ENST00000489857 RNF39Q9H2S5 420 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 RGL1Q9NZL6 768 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 PPME1Q9Y570 386 aa16.77■□□□□ 0.28
FAM3D-204ENST00000489857 F8W810 466 aa16.76■□□□□ 0.27
FAM3D-204ENST00000489857 ZBTB39O15060 712 aa16.76■□□□□ 0.27
FAM3D-204ENST00000489857 INPPL1O15357 1258 aa16.76■□□□□ 0.27
FAM3D-204ENST00000489857 TEX28O15482 410 aa16.76■□□□□ 0.27
FAM3D-204ENST00000489857 NARSO43776 548 aaKnown RBP16.76■□□□□ 0.27
FAM3D-204ENST00000489857 DKC1O60832 514 aaKnown RBP eCLIP16.76■□□□□ 0.27
FAM3D-204ENST00000489857 REC8O95072 547 aa16.76■□□□□ 0.27
FAM3D-204ENST00000489857 MYBP10242 640 aa16.76■□□□□ 0.27
FAM3D-204ENST00000489857 ITGA4P13612 1032 aa16.76■□□□□ 0.27
FAM3D-204ENST00000489857 YWHABP31946 246 aaKnown RBP16.76■□□□□ 0.27
FAM3D-204ENST00000489857 OR1G1P47890 313 aa16.76■□□□□ 0.27
FAM3D-204ENST00000489857 STK3Q13188 491 aa16.76■□□□□ 0.27
FAM3D-204ENST00000489857 EMC2Q15006 297 aa16.76■□□□□ 0.27
FAM3D-204ENST00000489857 EPHA7Q15375 998 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms