RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 FGF18O76093 207 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 STBD1O95210 358 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 PFKFB1P16118 471 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 DNAJB1P25685 340 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 CDC25BP30305 580 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 MCM7P33993 719 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 GTF2F1P35269 517 aaKnown RBP eCLIP13.05□□□□□ -0.322e-6■■■■□ 26
GGPS1-207ENST00000489692 IRS1P35568 1242 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 NRIP1P48552 1158 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 NDUFA8P51970 172 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 FAM189BP81408 668 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 RESP18Q5W5W9 173 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 SARM1Q6SZW1 724 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 ZNF558Q96NG5 402 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 EIF2AK1Q9BQI3 630 aaKnown RBP13.05□□□□□ -0.32
GGPS1-207ENST00000489692 BPIFA3Q9BQP9 254 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 TLE6Q9H808 572 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 TTC12Q9H892 705 aaPredicted RBP13.05□□□□□ -0.32
GGPS1-207ENST00000489692 ENTPD7Q9NQZ7 604 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 TLR9Q9NR96 1032 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 INPP5FQ9Y2H2 1132 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 PCDHGC5Q9Y5F6 944 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 COL4A4P53420 1690 aaPredicted RBP13.05□□□□□ -0.32
GGPS1-207ENST00000489692 MICAL3Q7RTP6 2002 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 TTC28Q96AY4 2481 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 PTPRSQ13332 1948 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 IGKV6-21A0A0C4DH24 114 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 A0A0U1RQF3 1178 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 A0A1B0GVL5 298 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 BMP15O95972 392 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 SKIP12755 728 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 PBX3P40426 434 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 KRT17Q04695 432 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 EMC2Q15006 297 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 IQCB1Q15051 598 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 PLPP4Q5VZY2 271 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 ADGRD2Q7Z7M1 963 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 C4orf19Q8IY42 314 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 CEP57L1Q8IYX8 460 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 GJD3Q8N144 294 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
GGPS1-207ENST00000489692 NEK9Q8TD19 979 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 TCP11Q8WWU5 503 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 PRPF31Q8WWY3 499 aaKnown RBP13.04□□□□□ -0.32
GGPS1-207ENST00000489692 TNFRSF25Q93038 417 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 CASD1Q96PB1 797 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 NAT10Q9H0A0 1025 aaKnown RBP13.04□□□□□ -0.32
GGPS1-207ENST00000489692 DNAJC25Q9H1X3 360 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 CHST12Q9NRB3 414 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 WRAP73Q9P2S5 460 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-207ENST00000489692 PPME1Q9Y570 386 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 KAT6AQ92794 2004 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 COL4A6Q14031 1691 aa13.04□□□□□ -0.32
GGPS1-207ENST00000489692 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 PER2O15055 1255 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 ZBTB39O15060 712 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 LINC01565O15544 149 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 AP5Z1O43299 807 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 ERLIN2O94905 339 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 ZNF202O95125 648 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 EOMESO95936 686 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 PPM1AP35813 382 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 UBE3AQ05086 875 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 RNASELQ05823 741 aaKnown RBP13.03□□□□□ -0.32
GGPS1-207ENST00000489692 LAMTOR4Q0VGL1 99 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 CAMK1Q14012 370 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 KCNT2Q6UVM3 1135 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 GLB1LQ6UWU2 654 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 LUZP1Q86V48 1076 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 KRI1Q8N9T8 703 aaKnown RBP13.03□□□□□ -0.32
GGPS1-207ENST00000489692 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 LPPQ93052 612 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 CEP89Q96ST8 783 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 MTRQ99707 1265 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 C1QTNF1Q9BXJ1 281 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 MRPL9Q9BYD2 267 aaKnown RBP13.03□□□□□ -0.32
GGPS1-207ENST00000489692 GBP3Q9H0R5 595 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 CWH43Q9H720 699 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 SPG21Q9NZD8 308 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 KIAA1468Q9P260 1216 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 CD207Q9UJ71 328 aa13.03□□□□□ -0.32
GGPS1-207ENST00000489692 GOLGA6L19H0YKK7 550 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 GAS2O43903 313 aaKnown RBP13.02□□□□□ -0.33
GGPS1-207ENST00000489692 ZC3H11AO75152 810 aaKnown RBP eCLIP13.02□□□□□ -0.33
GGPS1-207ENST00000489692 SYKP43405 635 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 PHKA2P46019 1235 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 ALDH7A1P49419 539 aaKnown RBP13.02□□□□□ -0.33
GGPS1-207ENST00000489692 TOB1P50616 345 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-207ENST00000489692 RAB27AP51159 221 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 ZNF75DP51815 510 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 DLX2Q07687 328 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-207ENST00000489692 NCBP1Q09161 790 aaKnown RBP13.02□□□□□ -0.33
GGPS1-207ENST00000489692 TFDP1Q14186 410 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 BMS1Q14692 1282 aaKnown RBP13.02□□□□□ -0.33
GGPS1-207ENST00000489692 ZNF174Q15697 407 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 CLLU1OSQ5K130 101 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 SHC4Q6S5L8 630 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 C11orf57Q6ZUT1 292 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-207ENST00000489692 TMC7Q7Z402 723 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms