RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 CPXCR1Q8N123 301 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 EHBP1Q8NDI1 1231 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 HDAC7Q8WUI4 952 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 HVCN1Q96D96 273 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 WDR11Q9BZH6 1224 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 WRAP73Q9P2S5 460 aaPredicted RBP10.62□□□□□ -0.71
NOD1-208ENST00000489614 TRIM10Q9UDY6 481 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 FBXO40Q9UH90 709 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 hCG_2014768A0A024R1R8 64 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 LRRD1A4D1F6 860 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 N4BP3O15049 544 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 HSF2BPO75031 334 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 FAM107AO95990 144 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 FUT4P22083 530 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 PABPC4Q13310 644 aaKnown RBP eCLIP10.62□□□□□ -0.71
NOD1-208ENST00000489614 QPCTQ16769 361 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 ARSHQ5FYA8 562 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 RRAGBQ5VZM2 374 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 SAPCD2Q86UD0 394 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 SLC10A4Q96EP9 437 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 PREBQ9HCU5 417 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 KCNH7Q9NS40 1196 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 RHBDL2Q9NX52 303 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 DOCK3Q8IZD9 2030 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 A6NHS1 94 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 SPATA31C2B4DYI2 1134 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 ATG7O95352 703 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 ZNF18P17022 549 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 OSBPP22059 807 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 CASP1P29466 404 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 STAT6P42226 847 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 ALDH5A1P51649 535 aaPredicted RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 XRCC4Q13426 336 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 DRP2Q13474 957 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 GIMAP8Q8ND71 665 aaPredicted RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 PHC3Q8NDX5 983 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 RAB34Q9BZG1 259 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 KATNBL1Q9H079 304 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 GALNT8Q9NY28 637 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 SLC5A4Q9NY91 659 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 MYMKA6NI61 221 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 LRRC10BA6NIK2 292 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 ZNF185O15231 689 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 CREB3O43889 395 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 SLITRK3O94933 977 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 CA8P35219 290 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 ERVK-9P63128 1117 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 ERVK-24P63145 666 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 C2orf54Q08AI8 447 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 FSTL1Q12841 308 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 TUBB2AQ13885 445 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 APTXQ7Z2E3 356 aaKnown RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 ABRAQ8N0Z2 381 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 TUBB2BQ9BVA1 445 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 LNPEPQ9UIQ6 1025 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 FAM184BQ9ULE4 1060 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 TFR2Q9UP52 801 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 CEP350Q5VT06 3117 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 AKR1B15C9JRZ8 316 aaPredicted RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 RPN1P04843 607 aaKnown RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 NAT1P18440 290 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 NR1D1P20393 614 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 UBA7P41226 1012 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 TBX2Q13207 712 aaPredicted RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 ZNF658Q5TYW1 1059 aaPredicted RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 SFMBT2Q5VUG0 894 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 ZC3H3Q8IXZ2 948 aaKnown RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 TRMT44Q8IYL2 757 aaKnown RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 C2orf69Q8N8R5 385 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 MLKLQ8NB16 471 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 NEK9Q8TD19 979 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 PRCCQ92733 491 aaPredicted RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 RMDN3Q96TC7 470 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 EIF2AK1Q9BQI3 630 aaKnown RBP10.61□□□□□ -0.71
NOD1-208ENST00000489614 NT5C3AQ9H0P0 336 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 MROH8Q9H579 483 aa10.61□□□□□ -0.71
NOD1-208ENST00000489614 IGKV6D-21A0A0A0MT36 114 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 RASSF10A6NK89 507 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 ERCC5P28715 1186 aaPredicted RBP10.6□□□□□ -0.71
NOD1-208ENST00000489614 CCND2P30279 289 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 EPHA7Q15375 998 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 TAF11Q15544 211 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 ZNF792Q3KQV3 632 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 FAM114A1Q8IWE2 563 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 SYT2Q8N9I0 419 aaPredicted RBP10.6□□□□□ -0.71
NOD1-208ENST00000489614 RDM1Q8NG50 284 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 NSUN6Q8TEA1 469 aaKnown RBP10.6□□□□□ -0.71
NOD1-208ENST00000489614 SNX29Q8TEQ0 813 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 LARP4BQ92615 738 aaKnown RBP10.6□□□□□ -0.71
NOD1-208ENST00000489614 KCNN1Q92952 543 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 SLX1AQ9BQ83 275 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 PVALEFA0A1B0GWK0 134 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 PDHXO00330 501 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 ATP9AO75110 1047 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 NR3C2P08235 984 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 ZNF24P17028 368 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 MDH1P40925 334 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms