RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 RLFQ13129 1914 aa16.2■□□□□ 0.18
COL9A1-208ENST00000489611 PSAPP07602 524 aa16.2■□□□□ 0.18
COL9A1-208ENST00000489611 GALCP54803 685 aa16.2■□□□□ 0.18
COL9A1-208ENST00000489611 GJB7Q6PEY0 223 aa16.2■□□□□ 0.18
COL9A1-208ENST00000489611 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.2■□□□□ 0.18
COL9A1-208ENST00000489611 DAAM2Q86T65 1068 aa16.2■□□□□ 0.18
COL9A1-208ENST00000489611 RASGEF1CQ8N431 466 aa16.2■□□□□ 0.18
COL9A1-208ENST00000489611 REPS2Q8NFH8 660 aa16.2■□□□□ 0.18
COL9A1-208ENST00000489611 WHAMMQ8TF30 809 aa16.2■□□□□ 0.18
COL9A1-208ENST00000489611 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.2■□□□□ 0.18
COL9A1-208ENST00000489611 HOXC10Q9NYD6 342 aa16.2■□□□□ 0.18
COL9A1-208ENST00000489611 AMFRQ9UKV5 643 aa16.2■□□□□ 0.18
COL9A1-208ENST00000489611 BACH1O14867 736 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 DGAT1O75907 488 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 PEX3P56589 373 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 BAATQ14032 418 aaPredicted RBP16.19■□□□□ 0.18
COL9A1-208ENST00000489611 VGLL4Q14135 290 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 PHLDB3Q6NSJ2 640 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 MOB2Q70IA6 237 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 GLYCTKQ8IVS8 523 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 LNX1Q8TBB1 728 aaPredicted RBP16.19■□□□□ 0.18
COL9A1-208ENST00000489611 TMC2Q8TDI7 906 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 KCNN1Q92952 543 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 ATG4CQ96DT6 458 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 HES6Q96HZ4 224 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 MS4A14Q96JA4 679 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 TEX13BQ9BXU2 312 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 CALCOCO1Q9P1Z2 691 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 TBX20Q9UMR3 447 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 STXBP5LQ9Y2K9 1186 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 WDR81Q562E7 1941 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 COL11A1P12107 1806 aaPredicted RBP16.19■□□□□ 0.18
COL9A1-208ENST00000489611 A6NNZ2 444 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 RNF40O75150 1001 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 ZMYND10O75800 440 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 CCNE2O96020 404 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 MYBL2P10244 700 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 MXI1P50539 228 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 CUL1Q13616 776 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 TUBB8Q3ZCM7 444 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 NOL9Q5SY16 702 aaKnown RBP16.19■□□□□ 0.18
COL9A1-208ENST00000489611 FAM102BQ5T8I3 360 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 SNRNP48Q6IEG0 339 aaKnown RBP16.19■□□□□ 0.18
COL9A1-208ENST00000489611 MREGQ8N565 214 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 SCFD2Q8WU76 684 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 AGPAT1Q99943 283 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 IKZF4Q9H2S9 585 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 SLITRK6Q9H5Y7 841 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 TMOD4Q9NZQ9 345 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 CLEC11AQ9Y240 323 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 FAN1Q9Y2M0 1017 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 SNCAIPQ9Y6H5 919 aa16.19■□□□□ 0.18
COL9A1-208ENST00000489611 ARID2Q68CP9 1835 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 GOLGA8KD6RF30 607 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 KIAA0391O15091 583 aaKnown RBP16.18■□□□□ 0.18
COL9A1-208ENST00000489611 SLC16A4O15374 487 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 ATP9AO75110 1047 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 HEXIM1O94992 359 aaKnown RBP16.18■□□□□ 0.18
COL9A1-208ENST00000489611 SYF2O95926 243 aaKnown RBP16.18■□□□□ 0.18
COL9A1-208ENST00000489611 GZMAP12544 262 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 MFAP3P55082 362 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 PPFIA1Q13136 1202 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 BRDTQ58F21 947 aaPredicted RBP16.18■□□□□ 0.18
COL9A1-208ENST00000489611 SND1Q7KZF4 910 aaKnown RBP eCLIP16.18■□□□□ 0.18
COL9A1-208ENST00000489611 MAEAQ7L5Y9 396 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 NT5DC3Q86UY8 548 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 PNMA8AQ86V59 439 aaPredicted RBP16.18■□□□□ 0.18
COL9A1-208ENST00000489611 RDH13Q8NBN7 331 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 TMEM161BQ8NDZ6 487 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 MORC4Q8TE76 937 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 HDAC7Q8WUI4 952 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 CBWD1Q9BRT8 395 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 ACAD9Q9H845 621 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 KIAA1586Q9HCI6 787 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 UBE2TQ9NPD8 197 aaPredicted RBP16.18■□□□□ 0.18
COL9A1-208ENST00000489611 KMT5AQ9NQR1 393 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 ZNF214Q9UL59 606 aaPredicted RBP16.18■□□□□ 0.18
COL9A1-208ENST00000489611 COQ4Q9Y3A0 265 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 LOC285556D6RIA3 1793 aa16.18■□□□□ 0.18
COL9A1-208ENST00000489611 TMCO5BA8MYB1 307 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 HSF2BPO75031 334 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 NPTX2P47972 431 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 HMGCS2P54868 508 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 PLS1Q14651 629 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 SNRNP35Q16560 246 aaKnown RBP16.17■□□□□ 0.18
COL9A1-208ENST00000489611 UGCGQ16739 394 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 KRT39Q6A163 491 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 ANO5Q75V66 913 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 MAATS1Q7Z4T9 603 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 SLC35G2Q8TBE7 412 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 FBXL18Q96ME1 805 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 RUFY1Q96T51 708 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 ISCUQ9H1K1 167 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 CARD9Q9H257 536 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 IGSF9BQ9UPX0 1349 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 MIF4GDA9UHW6 222 aaKnown RBP16.17■□□□□ 0.18
COL9A1-208ENST00000489611 TULP1O00294 542 aaPredicted RBP16.17■□□□□ 0.18
COL9A1-208ENST00000489611 FOXN3O00409 490 aaPredicted RBP16.17■□□□□ 0.18
COL9A1-208ENST00000489611 CEP104O60308 925 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms