RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 SLFN12Q8IYM2 578 aa21.72■■□□□ 1.07
APTX-229ENST00000489583 ZDHHC14Q8IZN3 488 aa21.72■■□□□ 1.07
APTX-229ENST00000489583 C12orf76Q8N812 135 aaPredicted RBP21.72■■□□□ 1.07
APTX-229ENST00000489583 PRPF31Q8WWY3 499 aaKnown RBP21.72■■□□□ 1.07
APTX-229ENST00000489583 LARP6Q9BRS8 491 aaKnown RBP21.72■■□□□ 1.07
APTX-229ENST00000489583 LIMD1Q9UGP4 676 aa21.72■■□□□ 1.07
APTX-229ENST00000489583 KCNJ14Q9UNX9 436 aa21.72■■□□□ 1.07
APTX-229ENST00000489583 TBX3O15119 743 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 SSBP05455 408 aaKnown RBP eCLIP21.71■■□□□ 1.07
APTX-229ENST00000489583 WEE2P0C1S8 567 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 EPCAMP16422 314 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 VCPP55072 806 aaKnown RBP21.71■■□□□ 1.07
APTX-229ENST00000489583 NPEPPSP55786 919 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 LAMTOR4Q0VGL1 99 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 TCF15Q12870 199 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 TFDP1Q14186 410 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 PCBP1Q15365 356 aaKnown RBP eCLIP21.71■■□□□ 1.07
APTX-229ENST00000489583 XKR9Q5GH70 373 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 NCAPH2Q6IBW4 605 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 TMC5Q6UXY8 1006 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 CCDC149Q6ZUS6 474 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 OTOP3Q7RTS5 596 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 TMEM143Q96AN5 459 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 CEP89Q96ST8 783 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 TMEM175Q9BSA9 504 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 IFT122Q9HBG6 1241 aa21.71■■□□□ 1.07
APTX-229ENST00000489583 M0R2N6 131 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 SLC37A4O43826 429 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 STBD1O95210 358 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 URODP06132 367 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 ITGA4P13612 1032 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 YWHABP31946 246 aaKnown RBP21.7■■□□□ 1.06
APTX-229ENST00000489583 SLC11A1P49279 550 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 MXD4Q14582 209 aaPredicted RBP21.7■■□□□ 1.06
APTX-229ENST00000489583 EPHA7Q15375 998 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 C4orf19Q8IY42 314 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 RNF149Q8NC42 400 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 LXNQ9BS40 222 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 TRIM6Q9C030 488 aaPredicted RBP21.7■■□□□ 1.06
APTX-229ENST00000489583 ZSWIM4Q9H7M6 989 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 DNAJB4Q9UDY4 337 aa21.7■■□□□ 1.06
APTX-229ENST00000489583 WDR81Q562E7 1941 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 EML1O00423 815 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 GFRA3O60609 400 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 BRD1O95696 1058 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 AXLP30530 894 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 PTPN14Q15678 1187 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 NOTUMQ6P988 496 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 PIK3AP1Q6ZUJ8 805 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 TMEM173Q86WV6 379 aaPredicted RBP21.69■■□□□ 1.06
APTX-229ENST00000489583 AIFM3Q96NN9 605 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 PHOX2BQ99453 314 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 MTRQ99707 1265 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 PHF20Q9BVI0 1012 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 DHX33Q9H6R0 707 aaKnown RBP21.69■■□□□ 1.06
APTX-229ENST00000489583 KCNMB3Q9NPA1 279 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 BMP2KQ9NSY1 1161 aaPredicted RBP21.69■■□□□ 1.06
APTX-229ENST00000489583 CDH22Q9UJ99 828 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 GTF3C3Q9Y5Q9 886 aa21.69■■□□□ 1.06
APTX-229ENST00000489583 POMCP01189 267 aa21.68■■□□□ 1.06
APTX-229ENST00000489583 ADH1AP07327 375 aa21.68■■□□□ 1.06
APTX-229ENST00000489583 AK2P54819 239 aa21.68■■□□□ 1.06
APTX-229ENST00000489583 EMC2Q15006 297 aa21.68■■□□□ 1.06
APTX-229ENST00000489583 MRPL10Q7Z7H8 261 aaKnown RBP21.68■■□□□ 1.06
APTX-229ENST00000489583 ZNF280BQ86YH2 543 aa21.68■■□□□ 1.06
APTX-229ENST00000489583 TPH2Q8IWU9 490 aa21.68■■□□□ 1.06
APTX-229ENST00000489583 FAM86C1Q9NVL1 165 aa21.68■■□□□ 1.06
APTX-229ENST00000489583 VAV3Q9UKW4 847 aa21.68■■□□□ 1.06
APTX-229ENST00000489583 MEIS3P2A8K0S8 358 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 H0Y858 1186 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 C2CD2LO14523 706 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 GALR2O43603 387 aaPredicted RBP21.67■■□□□ 1.06
APTX-229ENST00000489583 ASGR2P07307 311 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 RFX1P22670 979 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 OR1G1P47890 313 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 ANKRD1Q15327 319 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 ASTLQ6HA08 431 aaPredicted RBP21.67■■□□□ 1.06
APTX-229ENST00000489583 AGMOQ6ZNB7 445 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 SLC22A17Q8WUG5 538 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 STAMQ92783 540 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 CCDC51Q96ER9 411 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 FBXL21Q9UKT6 434 aa21.67■■□□□ 1.06
APTX-229ENST00000489583 STK36Q9NRP7 1315 aa21.66■■□□□ 1.06
APTX-229ENST00000489583 INO80B-WBP1J3KQ70 363 aa21.66■■□□□ 1.06
APTX-229ENST00000489583 NRP1O14786 923 aa21.66■■□□□ 1.06
APTX-229ENST00000489583 PDGFBP01127 241 aaPredicted RBP21.66■■□□□ 1.06
APTX-229ENST00000489583 NCLP19338 710 aaKnown RBP21.66■■□□□ 1.06
APTX-229ENST00000489583 C15orf39Q6ZRI6 1047 aa21.66■■□□□ 1.06
APTX-229ENST00000489583 GPR149Q86SP6 731 aa21.66■■□□□ 1.06
APTX-229ENST00000489583 FERMT3Q86UX7 667 aa21.66■■□□□ 1.06
APTX-229ENST00000489583 DYDC2Q96IM9 177 aa21.66■■□□□ 1.06
APTX-229ENST00000489583 KLHL5Q96PQ7 755 aa21.66■■□□□ 1.06
APTX-229ENST00000489583 PRG3Q9Y2Y8 225 aaPredicted RBP21.66■■□□□ 1.06
APTX-229ENST00000489583 DDHD2O94830 711 aa21.65■■□□□ 1.06
APTX-229ENST00000489583 SOD2P04179 222 aa21.65■■□□□ 1.06
APTX-229ENST00000489583 KRT2P35908 639 aa21.65■■□□□ 1.06
APTX-229ENST00000489583 CLCN4P51793 760 aa21.65■■□□□ 1.06
APTX-229ENST00000489583 CYP4A11Q02928 519 aa21.65■■□□□ 1.06
APTX-229ENST00000489583 CTTNQ14247 550 aaKnown RBP21.65■■□□□ 1.06
APTX-229ENST00000489583 NPY5RQ15761 445 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms