RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 NECTIN4Q96NY8 510 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 KLHL5Q96PQ7 755 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 PHF20Q9BVI0 1012 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 C22orf23Q9BZE7 217 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 RNF39Q9H2S5 420 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 MIOSQ9NXC5 875 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 RGL1Q9NZL6 768 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 COL4A3BPQ9Y5P4 624 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 VWA8A3KMH1 1905 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 WDR87Q6ZQQ6 2873 aa11.27□□□□□ -0.6
CSF3R-213ENST00000489551 NOTCH4Q99466 2003 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 NRP1O14786 923 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 GALR2O43603 387 aaPredicted RBP11.27□□□□□ -0.61
CSF3R-213ENST00000489551 PI15O43692 258 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 CTDNEP1O95476 244 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 SSBP05455 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
CSF3R-213ENST00000489551 SRGAP2CP0DJJ0 459 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 NPR3P17342 541 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 QARSP47897 775 aaKnown RBP11.27□□□□□ -0.61
CSF3R-213ENST00000489551 RAB27AP51159 221 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 LAMTOR4Q0VGL1 99 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 SCRN1Q12765 414 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 MTMR3Q13615 1198 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 ATAT1Q5SQI0 421 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 CWF19L1Q69YN2 538 aaKnown RBP11.27□□□□□ -0.61
CSF3R-213ENST00000489551 GPR149Q86SP6 731 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 TRIM22Q8IYM9 498 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 UBALD2Q8IYN6 164 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 RNF168Q8IYW5 571 aaPredicted RBP11.27□□□□□ -0.61
CSF3R-213ENST00000489551 EIF2AQ9BY44 585 aaKnown RBP11.27□□□□□ -0.61
CSF3R-213ENST00000489551 INO80BQ9C086 356 aaPredicted RBP11.27□□□□□ -0.61
CSF3R-213ENST00000489551 XPNPEP1Q9NQW7 623 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 DZANK1Q9NVP4 752 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 MARCH5Q9NX47 278 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 DBR1Q9UK59 544 aaKnown RBP11.27□□□□□ -0.61
CSF3R-213ENST00000489551 MYH15Q9Y2K3 1946 aa11.27□□□□□ -0.61
CSF3R-213ENST00000489551 FANCMQ8IYD8 2048 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 WNT7AO00755 349 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 ST18O60284 1047 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 GFRA3O60609 400 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 POMCP01189 267 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 P4HBP07237 508 aaKnown RBP11.26□□□□□ -0.61
CSF3R-213ENST00000489551 SKIP12755 728 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 RNASELQ05823 741 aaKnown RBP11.26□□□□□ -0.61
CSF3R-213ENST00000489551 PPP4R3AQ6IN85 833 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 ASCL5Q7RTU5 278 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 KRT25Q7Z3Z0 450 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 SRGAP1Q7Z6B7 1085 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 POTEDQ86YR6 584 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 C4orf19Q8IY42 314 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 COLGALT2Q8IYK4 626 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 TDRD5Q8NAT2 981 aaKnown RBP11.26□□□□□ -0.61
CSF3R-213ENST00000489551 ATOH1Q92858 354 aaPredicted RBP11.26□□□□□ -0.61
CSF3R-213ENST00000489551 DYDC2Q96IM9 177 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 CEP170P1Q96L14 293 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 LXNQ9BS40 222 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 TM6SF1Q9BZW5 370 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 RSAD1Q9HA92 442 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 USTQ9Y2C2 406 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 HES2Q9Y543 173 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 CYP46A1Q9Y6A2 500 aa11.26□□□□□ -0.61
CSF3R-213ENST00000489551 PROB1E7EW31 1015 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 CPLX1O14810 134 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 INPPL1O15357 1258 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 CCNT1O60563 726 aaKnown RBP11.25□□□□□ -0.61
CSF3R-213ENST00000489551 SLITRK3O94933 977 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 REC8O95072 547 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 MYBP10242 640 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 NCLP19338 710 aaKnown RBP11.25□□□□□ -0.61
CSF3R-213ENST00000489551 YWHABP31946 246 aaKnown RBP11.25□□□□□ -0.61
CSF3R-213ENST00000489551 GIT2Q14161 759 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 CTTNQ14247 550 aaKnown RBP11.25□□□□□ -0.61
CSF3R-213ENST00000489551 EMC2Q15006 297 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 EPHA7Q15375 998 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 AMHR2Q16671 573 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 ASTLQ6HA08 431 aaPredicted RBP11.25□□□□□ -0.61
CSF3R-213ENST00000489551 GALNT17Q6IS24 598 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 NEK8Q86SG6 692 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 FERMT3Q86UX7 667 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 CABP7Q86V35 215 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 GSTCDQ8NEC7 633 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 RSPH1Q8WYR4 309 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 TNFRSF25Q93038 417 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 PGBD4Q96DM1 585 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 CPB2Q96IY4 423 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 FAM20AQ96MK3 541 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 JPH2Q9BR39 696 aaPredicted RBP11.25□□□□□ -0.61
CSF3R-213ENST00000489551 TMEM175Q9BSA9 504 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 FAN1Q9Y2M0 1017 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 IPPQ9Y573 584 aa11.25□□□□□ -0.61
CSF3R-213ENST00000489551 COL4A3Q01955 1670 aa11.24□□□□□ -0.61
CSF3R-213ENST00000489551 A0A087WWV3 80 aa11.24□□□□□ -0.61
CSF3R-213ENST00000489551 C2CD2LO14523 706 aa11.24□□□□□ -0.61
CSF3R-213ENST00000489551 EPB41L2O43491 1005 aaKnown RBP11.24□□□□□ -0.61
CSF3R-213ENST00000489551 NARSO43776 548 aaKnown RBP11.24□□□□□ -0.61
CSF3R-213ENST00000489551 TSPAN1O60635 241 aa11.24□□□□□ -0.61
CSF3R-213ENST00000489551 SOD2P04179 222 aa11.24□□□□□ -0.61
CSF3R-213ENST00000489551 ALDH2P05091 517 aa11.24□□□□□ -0.61
CSF3R-213ENST00000489551 FDPSP14324 419 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms