RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 RBM19Q9Y4C8 960 aaKnown RBP19.16■□□□□ 0.66
MDC1-206ENST00000489540 MTCH2Q9Y6C9 303 aa19.16■□□□□ 0.66
MDC1-206ENST00000489540 GBF1Q92538 1859 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 PHLPP2Q6ZVD8 1323 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 LOXHD1Q8IVV2 1947 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 A0A1B0GUA9 196 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 CCDC169A6NNP5 214 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 ACKR2O00590 384 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 PEX3P56589 373 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 PTPROQ16827 1216 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 FOXD4L6Q3SYB3 417 aaPredicted RBP19.15■□□□□ 0.66
MDC1-206ENST00000489540 SPOUT1Q5T280 376 aaKnown RBP19.15■□□□□ 0.66
MDC1-206ENST00000489540 RRAGBQ5VZM2 374 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 GLB1LQ6UWU2 654 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 FOXD4L3Q6VB84 417 aaPredicted RBP19.15■□□□□ 0.66
MDC1-206ENST00000489540 KCNG4Q8TDN1 519 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 CPB2Q96IY4 423 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 UBN1Q9NPG3 1134 aa19.15■□□□□ 0.66
MDC1-206ENST00000489540 K7ERI5 159 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 B4GALT5O43286 388 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 NCLP19338 710 aaKnown RBP19.14■□□□□ 0.65
MDC1-206ENST00000489540 NPTX2P47972 431 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 SMTNP53814 917 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 MAPK7Q13164 816 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 PRPF4BQ13523 1007 aaKnown RBP19.14■□□□□ 0.65
MDC1-206ENST00000489540 MCM6Q14566 821 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 ARSHQ5FYA8 562 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 CLLU1OSQ5K130 101 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 GPBP1Q86WP2 473 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 LRRC43Q8N309 656 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 SPIRE2Q8WWL2 714 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 LARP4BQ92615 738 aaKnown RBP19.14■□□□□ 0.65
MDC1-206ENST00000489540 P2RX5Q93086 422 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 MRPL9Q9BYD2 267 aaKnown RBP19.14■□□□□ 0.65
MDC1-206ENST00000489540 CCDC113Q9H0I3 377 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 STK17AQ9UEE5 414 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 ODF2LQ9ULJ1 636 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 PCDHB12Q9Y5F1 795 aa19.14■□□□□ 0.65
MDC1-206ENST00000489540 ARID2Q68CP9 1835 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 CNTNAP2Q9UHC6 1331 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 SFI1A8K8P3 1242 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 CUTAO60888 179 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 PRKCBP05771 671 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 PLS3P13797 630 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 RAD51AP2Q09MP3 1159 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 DHX8Q14562 1220 aaKnown RBP19.13■□□□□ 0.65
MDC1-206ENST00000489540 CSPP1Q1MSJ5 1256 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 SLC27A1Q6PCB7 646 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 CCDC73Q6ZRK6 1079 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 HACE1Q8IYU2 909 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 HELQQ8TDG4 1101 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 LRRC15Q8TF66 581 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 LPPQ93052 612 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 KIFC3Q9BVG8 833 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 TRIM6Q9C030 488 aaPredicted RBP19.13■□□□□ 0.65
MDC1-206ENST00000489540 TMEM134Q9H6X4 195 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 KMT5AQ9NQR1 393 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 LARSQ9P2J5 1176 aaKnown RBP19.13■□□□□ 0.65
MDC1-206ENST00000489540 ATP6V1DQ9Y5K8 247 aa19.13■□□□□ 0.65
MDC1-206ENST00000489540 OFD1O75665 1012 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 LAG3P18627 525 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 DNM1Q05193 864 aaKnown RBP19.12■□□□□ 0.65
MDC1-206ENST00000489540 TMEM132AQ24JP5 1023 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 LONRF3Q496Y0 759 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 LRRC55Q6ZSA7 311 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 EIF2AQ9BY44 585 aaKnown RBP19.12■□□□□ 0.65
MDC1-206ENST00000489540 LMAN2LQ9H0V9 348 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 CWH43Q9H720 699 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 ARHGAP28Q9P2N2 729 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 ZDHHC9Q9Y397 364 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 IPPQ9Y573 584 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 MYO9BQ13459 2157 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 CDH23Q9H251 3354 aa19.12■□□□□ 0.65
MDC1-206ENST00000489540 N4BP3O15049 544 aa19.11■□□□□ 0.65
MDC1-206ENST00000489540 KRT18P05783 430 aaKnown RBP19.11■□□□□ 0.65
MDC1-206ENST00000489540 ITGA4P13612 1032 aa19.11■□□□□ 0.65
MDC1-206ENST00000489540 LIG1P18858 919 aa19.11■□□□□ 0.65
MDC1-206ENST00000489540 NOMO2Q5JPE7 1267 aa19.11■□□□□ 0.65
MDC1-206ENST00000489540 AGMOQ6ZNB7 445 aa19.11■□□□□ 0.65
MDC1-206ENST00000489540 SMG8Q8ND04 991 aaKnown RBP19.11■□□□□ 0.65
MDC1-206ENST00000489540 PPM1EQ8WY54 764 aa19.11■□□□□ 0.65
MDC1-206ENST00000489540 MRPL38Q96DV4 380 aaKnown RBP19.11■□□□□ 0.65
MDC1-206ENST00000489540 RSAD1Q9HA92 442 aa19.11■□□□□ 0.65
MDC1-206ENST00000489540 KANSL3Q9P2N6 904 aa19.11■□□□□ 0.65
MDC1-206ENST00000489540 RCOR1Q9UKL0 485 aa19.11■□□□□ 0.65
MDC1-206ENST00000489540 PLAGL2Q9UPG8 496 aa19.11■□□□□ 0.65
MDC1-206ENST00000489540 NPHP3-ACAD11A0A0J9YXS1 232 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 CARNS1A5YM72 827 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 H0YCG3 227 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 GIT2Q14161 759 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 CCDC85BQ15834 202 aaPredicted RBP19.1■□□□□ 0.65
MDC1-206ENST00000489540 SV2BQ7L1I2 683 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 APBB1IPQ7Z5R6 666 aaPredicted RBP19.1■□□□□ 0.65
MDC1-206ENST00000489540 MICALL1Q8N3F8 863 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 KLHL23Q8NBE8 558 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 COLGALT1Q8NBJ5 622 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 URGCPQ8TCY9 931 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 REEP2Q9BRK0 252 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 ADPGKQ9BRR6 497 aa19.1■□□□□ 0.65
MDC1-206ENST00000489540 CHD9Q3L8U1 2897 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms