RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 IFI16Q16666 785 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 TUSC1Q2TAM9 212 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 SLC9C1Q4G0N8 1177 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 HSP90AA4PQ58FG1 418 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 ARSHQ5FYA8 562 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 MUM1L1Q5H9M0 696 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 IQCEQ6IPM2 695 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 GBP6Q6ZN66 633 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 GADL1Q6ZQY3 521 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 TRIM59Q8IWR1 403 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 PDCL2Q8N4E4 241 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 CYP2W1Q8TAV3 490 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 TBC1D5Q92609 795 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 P2RX7Q99572 595 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 EIF3CQ99613 913 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 NTPCRQ9BSD7 190 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 SPATC1LQ9H0A9 340 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 DEF6Q9H4E7 631 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 AZI2Q9H6S1 392 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 ZCCHC17Q9NP64 241 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 A1CFQ9NQ94 594 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 RGL1Q9NZL6 768 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 EPN1Q9Y6I3 576 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 ATAD5Q96QE3 1844 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 UQCRHLA0A096LP55 91 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 TTC26A0AVF1 554 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 NDUFA10O95299 355 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 LDHAP00338 332 aaKnown RBP6.95□□□□□ -1.3
SF3A3-208ENST00000489537 UQCRHP07919 91 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 ZBTB48P10074 688 aaPredicted RBP6.95□□□□□ -1.3
SF3A3-208ENST00000489537 EDNRBP24530 442 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 PMS1P54277 932 aaKnown RBP6.95□□□□□ -1.3
SF3A3-208ENST00000489537 HERVK_113P62684 666 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 GTF2BQ00403 316 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 KIF5AQ12840 1032 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 NFX1Q12986 1120 aaKnown RBP6.95□□□□□ -1.3
SF3A3-208ENST00000489537 EXOC3L4Q17RC7 722 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 BRDTQ58F21 947 aaPredicted RBP6.95□□□□□ -1.3
SF3A3-208ENST00000489537 XKR9Q5GH70 373 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 MIIPQ5JXC2 388 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 SLFN12LQ6IEE8 588 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 SLC30A10Q6XR72 485 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 CTU1Q7Z7A3 348 aaKnown RBP6.95□□□□□ -1.3
SF3A3-208ENST00000489537 BPHLQ86WA6 291 aaPredicted RBP6.95□□□□□ -1.3
SF3A3-208ENST00000489537 TMEM139Q8IV31 216 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 RNF10Q8N5U6 811 aaKnown RBP6.95□□□□□ -1.3
SF3A3-208ENST00000489537 CCDC155Q8N6L0 562 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 MNS1Q8NEH6 495 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 CPLX3Q8WVH0 158 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 TCP11Q8WWU5 503 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 SLC7A3Q8WY07 619 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 BRI3BPQ8WY22 251 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 ERO1AQ96HE7 468 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 RPGRIP1Q96KN7 1286 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 ALS2CR12Q96Q35 445 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 SPAG5Q96R06 1193 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 RUSC1Q9BVN2 902 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 MMRN2Q9H8L6 949 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 ELP3Q9H9T3 547 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 ATP6V0A4Q9HBG4 840 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 SLC24A3Q9HC58 644 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 TRMT1Q9NXH9 659 aaKnown RBP6.95□□□□□ -1.3
SF3A3-208ENST00000489537 COL20A1Q9P218 1284 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 MAP10Q9P2G4 905 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 DNAI1Q9UI46 699 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 IVNS1ABPQ9Y6Y0 642 aa6.95□□□□□ -1.3
SF3A3-208ENST00000489537 ANO9A1A5B4 782 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 CTAGE9A4FU28 777 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 K7ENM7 598 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 BACH1O14867 736 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 AKR1B10O60218 316 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 EXOC3O60645 756 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 HIP1RO75146 1068 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 ATG7O95352 703 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 SLU7O95391 586 aaKnown RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 ADH1CP00326 375 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 SERPING1P05155 500 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 SUPT20HL2P0C7V6 817 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 BMP1P13497 986 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 KCNA2P16389 499 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 GTF2H1P32780 548 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 FXR1P51114 621 aaKnown RBP eCLIP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 ALDH5A1P51649 535 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 EFNA5P52803 228 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 NCKAP1LP55160 1127 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 MCCD1P59942 119 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 GNG11P61952 73 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 PSMC6P62333 389 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 UBXN2AP68543 259 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 CDC42EP1Q00587 391 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 ITGB3BPQ13352 177 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 CLUL1Q15846 466 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 SFMBT2Q5VUG0 894 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 PPP1R2P3Q6NXS1 205 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 METTL7BQ6UX53 244 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 ANKRD23Q86SG2 305 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 KIAA1328Q86T90 577 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 NCAPG2Q86XI2 1143 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 REXO1L1PQ8IX06 675 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms