RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 LAG3P18627 525 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 TXLNAP40222 546 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 EFNA5P52803 228 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 GRIN1Q05586 938 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 RNASELQ05823 741 aaKnown RBP14.78□□□□□ -0.04
CCL28-202ENST00000489442 RAD51AP2Q09MP3 1159 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 DHX8Q14562 1220 aaKnown RBP14.78□□□□□ -0.04
CCL28-202ENST00000489442 STK38Q15208 465 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 PTPAQ15257 358 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 MAPK6Q16659 721 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 CSPP1Q1MSJ5 1256 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 CDCA2Q69YH5 1023 aaPredicted RBP14.78□□□□□ -0.04
CCL28-202ENST00000489442 HACE1Q8IYU2 909 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 SYT2Q8N9I0 419 aaPredicted RBP14.78□□□□□ -0.04
CCL28-202ENST00000489442 URGCPQ8TCY9 931 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 RSPH1Q8WYR4 309 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 BSNDQ8WZ55 320 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 PRIMPOLQ96LW4 560 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 USP28Q96RU2 1077 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 RUSC1Q9BVN2 902 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 TIPINQ9BVW5 301 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 LMAN2LQ9H0V9 348 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 CSRNP2Q9H175 543 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 RNF19AQ9NV58 838 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 PLAGL2Q9UPG8 496 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 SRPRBQ9Y5M8 271 aaKnown RBP14.78□□□□□ -0.04
CCL28-202ENST00000489442 B4GALT5O43286 388 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 ITGB1P05556 798 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 PRKCBP05771 671 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 ZSCAN22P10073 491 aaPredicted RBP14.77□□□□□ -0.04
CCL28-202ENST00000489442 PEX3P56589 373 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 DMP1Q13316 513 aaPredicted RBP14.77□□□□□ -0.04
CCL28-202ENST00000489442 PRPF4BQ13523 1007 aaKnown RBP14.77□□□□□ -0.04
CCL28-202ENST00000489442 AMHR2Q16671 573 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 FOXD4L6Q3SYB3 417 aaPredicted RBP14.77□□□□□ -0.04
CCL28-202ENST00000489442 TMEM119Q4V9L6 283 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 TIGD5Q53EQ6 642 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 NOMO2Q5JPE7 1267 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 SPECC1Q5M775 1068 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 UBXN11Q5T124 520 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 SLC27A1Q6PCB7 646 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 FOXD4L3Q6VB84 417 aaPredicted RBP14.77□□□□□ -0.04
CCL28-202ENST00000489442 C1orf186Q6ZWK4 172 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 COLGALT1Q8NBJ5 622 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 ZNF558Q96NG5 402 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 EIF2AQ9BY44 585 aaKnown RBP14.77□□□□□ -0.04
CCL28-202ENST00000489442 CWH43Q9H720 699 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 RSAD1Q9HA92 442 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 UBN1Q9NPG3 1134 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 PRDM6Q9NQX0 595 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 THEGQ9P2T0 379 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 TFIP11Q9UBB9 837 aaKnown RBP14.77□□□□□ -0.04
CCL28-202ENST00000489442 HCSTQ9UBK5 93 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 CCDC39Q9UFE4 941 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 KCNG1Q9UIX4 513 aa14.77□□□□□ -0.04
CCL28-202ENST00000489442 PLXNA4Q9HCM2 1894 aa14.77□□□□□ -0.05
CCL28-202ENST00000489442 K7ERI5 159 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 OFD1O75665 1012 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 PLCG1P19174 1290 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 NCLP19338 710 aaKnown RBP14.76□□□□□ -0.05
CCL28-202ENST00000489442 ALDH7A1P49419 539 aaKnown RBP14.76□□□□□ -0.05
CCL28-202ENST00000489442 SLC12A3P55017 1021 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 SLC39A14Q15043 492 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 KARSQ15046 597 aaKnown RBP14.76□□□□□ -0.05
CCL28-202ENST00000489442 KCNT2Q6UVM3 1135 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 LRRC55Q6ZSA7 311 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 MRPL10Q7Z7H8 261 aaKnown RBP14.76□□□□□ -0.05
CCL28-202ENST00000489442 CDR2LQ86X02 465 aaPredicted RBP14.76□□□□□ -0.05
CCL28-202ENST00000489442 KRI1Q8N9T8 703 aaKnown RBP14.76□□□□□ -0.05
CCL28-202ENST00000489442 SPPL3Q8TCT6 385 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 MICAL1Q8TDZ2 1067 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 POF1BQ8WVV4 589 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 CLIC6Q96NY7 704 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 FAM193BQ96PV7 902 aaPredicted RBP14.76□□□□□ -0.05
CCL28-202ENST00000489442 ADPGKQ9BRR6 497 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 KIFC3Q9BVG8 833 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 APOL6Q9BWW8 343 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 GBP3Q9H0R5 595 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 FZD8Q9H461 694 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 C17orf75Q9HAS0 396 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 KMT5AQ9NQR1 393 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 KCND2Q9NZV8 630 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 PUF60Q9UHX1 559 aaKnown RBP14.76□□□□□ -0.05
CCL28-202ENST00000489442 FBXO2Q9UK22 296 aaPredicted RBP14.76□□□□□ -0.05
CCL28-202ENST00000489442 IPPQ9Y573 584 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 CNTNAP2Q9UHC6 1331 aa14.76□□□□□ -0.05
CCL28-202ENST00000489442 TDRD15B5MCY1 1934 aaKnown RBP14.75□□□□□ -0.05
CCL28-202ENST00000489442 A0A1B0GUA9 196 aa14.75□□□□□ -0.05
CCL28-202ENST00000489442 MEIS3P2A8K0S8 358 aa14.75□□□□□ -0.05
CCL28-202ENST00000489442 SFI1A8K8P3 1242 aa14.75□□□□□ -0.05
CCL28-202ENST00000489442 ACKR2O00590 384 aa14.75□□□□□ -0.05
CCL28-202ENST00000489442 N4BP3O15049 544 aa14.75□□□□□ -0.05
CCL28-202ENST00000489442 ZC3H11AO75152 810 aaKnown RBP eCLIP14.75□□□□□ -0.05
CCL28-202ENST00000489442 FGF18O76093 207 aa14.75□□□□□ -0.05
CCL28-202ENST00000489442 NPTXRO95502 500 aa14.75□□□□□ -0.05
CCL28-202ENST00000489442 KRT18P05783 430 aaKnown RBP14.75□□□□□ -0.05
CCL28-202ENST00000489442 GUCY2CP25092 1073 aa14.75□□□□□ -0.05
CCL28-202ENST00000489442 PPM1AP35813 382 aa14.75□□□□□ -0.05
CCL28-202ENST00000489442 NPTX2P47972 431 aa14.75□□□□□ -0.05
CCL28-202ENST00000489442 SMTNP53814 917 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms