RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 SLC18A3Q16572 532 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 TRIM68Q6AZZ1 485 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 CENPPQ6IPU0 288 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 FAM43BQ6ZT52 329 aaPredicted RBP12.68□□□□□ -0.38
SMTN-218ENST00000489337 ERICH1Q86X53 443 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 SCFD2Q8WU76 684 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 CELF4Q9BZC1 486 aaKnown RBP12.68□□□□□ -0.38
SMTN-218ENST00000489337 NSRP1Q9H0G5 558 aaKnown RBP12.68□□□□□ -0.38
SMTN-218ENST00000489337 RIOX1Q9H6W3 641 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 SLC5A4Q9NY91 659 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 RIPK3Q9Y572 518 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 CENPTQ96BT3 561 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 PBKQ96KB5 322 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 PRMT1Q99873 361 aaKnown RBP12.67□□□□□ -0.38
SMTN-218ENST00000489337 ECT2Q9H8V3 914 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 NOC2LQ9Y3T9 749 aaKnown RBP12.67□□□□□ -0.38
SMTN-218ENST00000489337 A0A1B0GUL6 1792 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 FAM86B1E9PN63 330 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 IRF6O14896 467 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 TLR2O60603 784 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 FAM86B2P0C5J1 330 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 ITGA4P13612 1032 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 PECAM1P16284 738 aaPredicted RBP12.67□□□□□ -0.38
SMTN-218ENST00000489337 EIF3BP55884 814 aaKnown RBP12.67□□□□□ -0.38
SMTN-218ENST00000489337 PSMC6P62333 389 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 GNPTABQ3T906 1256 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 NCAPG2Q86XI2 1143 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 FMO2Q99518 471 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 NYAP2Q9P242 653 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 RREB1Q92766 1687 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 MYO3BQ8WXR4 1341 aa12.67□□□□□ -0.38
SMTN-218ENST00000489337 HGSO14964 777 aaPredicted RBP12.66□□□□□ -0.38
SMTN-218ENST00000489337 LACTBP83111 547 aaPredicted RBP12.66□□□□□ -0.38
SMTN-218ENST00000489337 TAF11Q15544 211 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 ANKRD20A2Q5SQ80 823 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 ANKRD20A1Q5TYW2 823 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 ANKRD20A3Q5VUR7 823 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 SNRNP48Q6IEG0 339 aaKnown RBP12.66□□□□□ -0.38
SMTN-218ENST00000489337 PIGWQ7Z7B1 504 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 NUCKS1Q9H1E3 243 aaKnown RBP12.66□□□□□ -0.38
SMTN-218ENST00000489337 COL24A1Q17RW2 1714 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 A8MUI8 341 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 RGS16O15492 202 aaPredicted RBP12.66□□□□□ -0.38
SMTN-218ENST00000489337 LUC7L3O95232 432 aaKnown RBP12.66□□□□□ -0.38
SMTN-218ENST00000489337 NEFHP12036 1026 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 ATP2A2P16615 1042 aaKnown RBP12.66□□□□□ -0.38
SMTN-218ENST00000489337 USP11P51784 963 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 ATP11AP98196 1134 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 SLC30A9Q6PML9 568 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 FAM133AQ8N9E0 248 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 IL31RAQ8NI17 732 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 DYDC1Q8WWB3 177 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 TLCD1Q96CP7 247 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 PPP1R16BQ96T49 567 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.66□□□□□ -0.388e-7■■■■□ 25.1
SMTN-218ENST00000489337 LSM14BQ9BX40 385 aaKnown RBP12.66□□□□□ -0.38
SMTN-218ENST00000489337 EDEM3Q9BZQ6 932 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 GPRC5DQ9NZD1 345 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 HERC5Q9UII4 1024 aaKnown RBP12.66□□□□□ -0.38
SMTN-218ENST00000489337 USP20Q9Y2K6 914 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 VCAM1P19320 739 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 BLMHQ13867 455 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 ECM1Q16610 540 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 OSBPL1AQ9BXW6 950 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 CEP72Q9P209 647 aa12.66□□□□□ -0.38
SMTN-218ENST00000489337 POLR2AP24928 1970 aaKnown RBP12.66□□□□□ -0.38
SMTN-218ENST00000489337 CCDC188H7C350 402 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 SSR1P43307 286 aaKnown RBP12.65□□□□□ -0.38
SMTN-218ENST00000489337 NCALDP61601 193 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 HERC4Q5GLZ8 1057 aaPredicted RBP12.65□□□□□ -0.38
SMTN-218ENST00000489337 TATDN1Q6P1N9 297 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 DAAM2Q86T65 1068 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 METTL13Q8N6R0 699 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 UHMK1Q8TAS1 419 aaKnown RBP12.65□□□□□ -0.38
SMTN-218ENST00000489337 CHURC1Q8WUH1 139 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 C7orf25Q9BPX7 421 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 R3HDMLQ9H3Y0 253 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 FAM114A2Q9NRY5 505 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 ANKRD33BA6NCL7 494 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 SMIM24O75264 130 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 MYCP01106 439 aaPredicted RBP12.65□□□□□ -0.38
SMTN-218ENST00000489337 SHBGP04278 402 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 POLR2MP0CAP2 368 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 MYBL1P10243 752 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 PRPHP41219 470 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 IFI16Q16666 785 aaKnown RBP12.65□□□□□ -0.38
SMTN-218ENST00000489337 PEX26Q7Z412 305 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 DNAAF5Q86Y56 855 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 ACTRT1Q8TDG2 376 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 PLCD4Q9BRC7 762 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 TRIM51Q9BSJ1 452 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 ZFATQ9P243 1243 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 C10orf71Q711Q0 1435 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 CCDC169A6NNP5 214 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 KRT16P08779 473 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 TCERG1LQ5VWI1 586 aa12.65□□□□□ -0.38
SMTN-218ENST00000489337 LARP4BQ92615 738 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms