RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 ADHFE1Q8IWW8 467 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 VN1R2Q8NFZ6 395 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 ERMNQ8TAM6 284 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 EPHX3Q9H6B9 360 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 ENTPD7Q9NQZ7 604 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 DBR1Q9UK59 544 aaKnown RBP13.96□□□□□ -0.17
SRRM1-216ENST00000489130 BARX2Q9UMQ3 279 aaPredicted RBP13.96□□□□□ -0.17
SRRM1-216ENST00000489130 NOL7Q9UMY1 257 aaKnown RBP13.96□□□□□ -0.17
SRRM1-216ENST00000489130 A0A087WWV3 80 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 PI4K2BG5E9Z4 385 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 USO1O60763 962 aaKnown RBP13.95□□□□□ -0.18
SRRM1-216ENST00000489130 ZC3H11AO75152 810 aaKnown RBP eCLIP13.95□□□□□ -0.18
SRRM1-216ENST00000489130 NCLP19338 710 aaKnown RBP13.95□□□□□ -0.18
SRRM1-216ENST00000489130 RPA1P27694 616 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 SSTR3P32745 418 aaPredicted RBP13.95□□□□□ -0.18
SRRM1-216ENST00000489130 FXR2P51116 673 aaKnown RBP eCLIP13.95□□□□□ -0.18
SRRM1-216ENST00000489130 MBTD1Q05BQ5 628 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 AMHR2Q16671 573 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 NOTUMQ6P988 496 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 POTEGQ6S5H5 508 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 TMEM173Q86WV6 379 aaPredicted RBP13.95□□□□□ -0.18
SRRM1-216ENST00000489130 C4orf32Q8N8J7 132 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 MCPH1Q8NEM0 835 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 CCDC51Q96ER9 411 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 NACC1Q96RE7 527 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 POLR3FQ9H1D9 316 aaPredicted RBP13.95□□□□□ -0.18
SRRM1-216ENST00000489130 NRDE2Q9H7Z3 1164 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 RSAD1Q9HA92 442 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 INPP5FQ9Y2H2 1132 aa13.95□□□□□ -0.18
SRRM1-216ENST00000489130 CNTNAP2Q9UHC6 1331 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 HIDE1A8MVS5 230 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 NT5C1B-RDH14C9J2C7 533 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 INO80B-WBP1J3KQ70 363 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 GALTP07902 379 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 MUTP22033 750 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 TOB1P50616 345 aaPredicted RBP13.94□□□□□ -0.18
SRRM1-216ENST00000489130 NBR1Q14596 966 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
SRRM1-216ENST00000489130 HAUS3Q68CZ6 603 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 TMC7Q7Z402 723 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 MRPL43Q8N983 215 aaKnown RBP13.94□□□□□ -0.18
SRRM1-216ENST00000489130 SMG8Q8ND04 991 aaKnown RBP13.94□□□□□ -0.18
SRRM1-216ENST00000489130 CNNM3Q8NE01 707 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 URGCPQ8TCY9 931 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 TMEM169Q96HH4 297 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 TMX3Q96JJ7 454 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 POP1Q99575 1024 aaKnown RBP13.94□□□□□ -0.18
SRRM1-216ENST00000489130 UPF2Q9HAU5 1272 aaKnown RBP13.94□□□□□ -0.18
SRRM1-216ENST00000489130 UBN1Q9NPG3 1134 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 GPRC5CQ9NQ84 441 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 KIF3AQ9Y496 699 aa13.94□□□□□ -0.18
SRRM1-216ENST00000489130 INPPL1O15357 1258 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 B4GALT3O60512 393 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 CD2BP2O95400 341 aaKnown RBP13.93□□□□□ -0.18
SRRM1-216ENST00000489130 ARF4P18085 180 aaPredicted RBP13.93□□□□□ -0.18
SRRM1-216ENST00000489130 AFF1P51825 1210 aaKnown RBP13.93□□□□□ -0.18
SRRM1-216ENST00000489130 RBM10P98175 930 aaKnown RBP13.93□□□□□ -0.18
SRRM1-216ENST00000489130 RNASELQ05823 741 aaKnown RBP13.93□□□□□ -0.18
SRRM1-216ENST00000489130 NCBP1Q09161 790 aaKnown RBP13.93□□□□□ -0.18
SRRM1-216ENST00000489130 ZNF280BQ86YH2 543 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 IGSF21Q96ID5 467 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 CPB2Q96IY4 423 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 EIF2AQ9BY44 585 aaKnown RBP13.93□□□□□ -0.18
SRRM1-216ENST00000489130 ZBP1Q9H171 429 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 CSRNP2Q9H175 543 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 C11orf16Q9NQ32 467 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 KANSL3Q9P2N6 904 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 DNAJB4Q9UDY4 337 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 IPPQ9Y573 584 aa13.93□□□□□ -0.18
SRRM1-216ENST00000489130 C2orf71A6NGG8 1288 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 LAD1O00515 517 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 DDHD2O94830 711 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 SRGAP2BP0DMP2 458 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 SLC11A1P49279 550 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 PDIA5Q14554 519 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 BMS1Q14692 1282 aaKnown RBP13.92□□□□□ -0.18
SRRM1-216ENST00000489130 ECM1Q16610 540 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 CDCA2Q69YH5 1023 aaPredicted RBP13.92□□□□□ -0.18
SRRM1-216ENST00000489130 PADI6Q6TGC4 694 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 MAEAQ7L5Y9 396 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 DDX53Q86TM3 631 aaKnown RBP13.92□□□□□ -0.18
SRRM1-216ENST00000489130 VPS52Q8N1B4 723 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 IGSF22Q8N9C0 903 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 BCL7CQ8WUZ0 217 aaPredicted RBP13.92□□□□□ -0.18
SRRM1-216ENST00000489130 SUSD6Q92537 303 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 TBC1D32Q96NH3 1257 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 TMEM175Q9BSA9 504 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 GBP3Q9H0R5 595 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 USP15Q9Y4E8 981 aaPredicted RBP13.92□□□□□ -0.18
SRRM1-216ENST00000489130 PCDHB6Q9Y5E3 794 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 IRAK3Q9Y616 596 aa13.92□□□□□ -0.18
SRRM1-216ENST00000489130 C5orf42Q9H799 3197 aa13.91□□□□□ -0.18
SRRM1-216ENST00000489130 A0A1B0GUA9 196 aa13.91□□□□□ -0.18
SRRM1-216ENST00000489130 ARHGEF35A5YM69 484 aa13.91□□□□□ -0.18
SRRM1-216ENST00000489130 LRRIQ4A6NIV6 560 aa13.91□□□□□ -0.18
SRRM1-216ENST00000489130 B4GALT5O43286 388 aa13.91□□□□□ -0.18
SRRM1-216ENST00000489130 GPR37L1O60883 481 aa13.91□□□□□ -0.18
SRRM1-216ENST00000489130 CTSAP10619 480 aa13.91□□□□□ -0.18
SRRM1-216ENST00000489130 ITGA4P13612 1032 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms