RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CEP89Q96ST8 783 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 TMEM175Q9BSA9 504 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 NIFKQ9BYG3 293 aaKnown RBP18.21■□□□□ 0.51
USP48-210ENST00000489108 RHOBTB2Q9BYZ6 727 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 FOXQ1Q9C009 403 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 INO80BQ9C086 356 aaPredicted RBP18.21■□□□□ 0.51
USP48-210ENST00000489108 ARHGEF3Q9NR81 526 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 SUCLA2Q9P2R7 463 aaPredicted RBP18.21■□□□□ 0.51
USP48-210ENST00000489108 TPRP12270 2363 aaKnown RBP18.21■□□□□ 0.51
USP48-210ENST00000489108 EPG5Q9HCE0 2579 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 IGKV6-21A0A0C4DH24 114 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 MSH4O15457 936 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 EDIL3O43854 480 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 LRRN2O75325 713 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 GLUD1P00367 558 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 POMCP01189 267 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 SOD2P04179 222 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 URODP06132 367 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 ADH1AP07327 375 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 LAMP2P13473 410 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 PFKFB3Q16875 520 aaPredicted RBP18.2■□□□□ 0.5
USP48-210ENST00000489108 DCLRE1AQ6PJP8 1040 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 MAML2Q8IZL2 1156 aaPredicted RBP18.2■□□□□ 0.5
USP48-210ENST00000489108 ZNF707Q96C28 371 aaPredicted RBP18.2■□□□□ 0.5
USP48-210ENST00000489108 ZMYND12Q9H0C1 365 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 UNC45AQ9H3U1 944 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 C6orf50Q9HD87 102 aa18.2■□□□□ 0.5
USP48-210ENST00000489108 SEPT9Q9UHD8 586 aaPredicted RBP18.2■□□□□ 0.5
USP48-210ENST00000489108 GOLGA8AA7E2F4 631 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 GOLGA8BA8MQT2 603 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 STBD1O95210 358 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 SFNP31947 248 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 EXOSC10Q01780 885 aaKnown RBP18.19■□□□□ 0.5
USP48-210ENST00000489108 KIAA0319Q5VV43 1072 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 MRPL10Q7Z7H8 261 aaKnown RBP18.19■□□□□ 0.5
USP48-210ENST00000489108 ZNF410Q86VK4 478 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 REXO1Q8N1G1 1221 aaKnown RBP18.19■□□□□ 0.5
USP48-210ENST00000489108 GJA10Q969M2 543 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 HERC2P3Q9BVR0 1158 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 RSAD1Q9HA92 442 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 PIDD1Q9HB75 910 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 MARCH5Q9NX47 278 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 KANSL3Q9P2N6 904 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 DPP7Q9UHL4 492 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 SSX2IPQ9Y2D8 614 aa18.19■□□□□ 0.5
USP48-210ENST00000489108 MTCL1Q9Y4B5 1905 aaKnown RBP18.19■□□□□ 0.5
USP48-210ENST00000489108 GPR179Q6PRD1 2367 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 ESYT2A0FGR8 921 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 ANHXE9PGG2 379 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 GAS7O60861 476 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 KINO60870 393 aaKnown RBP18.18■□□□□ 0.5
USP48-210ENST00000489108 ADD1P35611 737 aaKnown RBP18.18■□□□□ 0.5
USP48-210ENST00000489108 XKR3Q5GH77 459 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 ELMSAN1Q6PJG2 1045 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 PALB2Q86YC2 1186 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 PJA1Q8NG27 643 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 NLRP4Q96MN2 994 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 RIT2Q99578 217 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 RPP25Q9BUL9 199 aaKnown RBP18.18■□□□□ 0.5
USP48-210ENST00000489108 NT5C3AQ9H0P0 336 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 RXFP1Q9HBX9 757 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 SLC2A4RGQ9NR83 387 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.18■□□□□ 0.5
USP48-210ENST00000489108 PRG3Q9Y2Y8 225 aaPredicted RBP18.18■□□□□ 0.5
USP48-210ENST00000489108 KMT2BQ9UMN6 2715 aaPredicted RBP18.18■□□□□ 0.5
USP48-210ENST00000489108 DOCK6Q96HP0 2047 aa18.18■□□□□ 0.5
USP48-210ENST00000489108 GAS2O43903 313 aaKnown RBP18.17■□□□□ 0.5
USP48-210ENST00000489108 JAK3P52333 1124 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 STARD6P59095 220 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 HTR4Q13639 388 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 VARS2Q5ST30 1063 aaKnown RBP18.17■□□□□ 0.5
USP48-210ENST00000489108 LRCH2Q5VUJ6 765 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 GET4Q7L5D6 327 aaPredicted RBP18.17■□□□□ 0.5
USP48-210ENST00000489108 SLC5A5Q92911 643 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 TEKT3Q9BXF9 490 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 IFT122Q9HBG6 1241 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 AGPAT5Q9NUQ2 364 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 NUMBLQ9Y6R0 609 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 SPTBN2O15020 2390 aa18.17■□□□□ 0.5
USP48-210ENST00000489108 KLF18A0A0U1RQI7 1052 aa18.16■□□□□ 0.5
USP48-210ENST00000489108 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
USP48-210ENST00000489108 MAFO75444 373 aaPredicted RBP18.16■□□□□ 0.5
USP48-210ENST00000489108 EFEMP2O95967 443 aa18.16■□□□□ 0.5
USP48-210ENST00000489108 OR1G1P47890 313 aa18.16■□□□□ 0.5
USP48-210ENST00000489108 GLUD2P49448 558 aa18.16■□□□□ 0.5
USP48-210ENST00000489108 ATXN1P54253 815 aaKnown RBP18.16■□□□□ 0.5
USP48-210ENST00000489108 GPC5P78333 572 aa18.16■□□□□ 0.5
USP48-210ENST00000489108 UBXN11Q5T124 520 aa18.16■□□□□ 0.5
USP48-210ENST00000489108 MIER3Q7Z3K6 550 aa18.16■□□□□ 0.5
USP48-210ENST00000489108 HDAC7Q8WUI4 952 aa18.16■□□□□ 0.5
USP48-210ENST00000489108 NCDNQ9UBB6 729 aa18.16■□□□□ 0.5
USP48-210ENST00000489108 MIA3Q5JRA6 1907 aa18.15■□□□□ 0.5
USP48-210ENST00000489108 F8W810 466 aa18.15■□□□□ 0.5
USP48-210ENST00000489108 PAPLNO95428 1278 aa18.15■□□□□ 0.5
USP48-210ENST00000489108 GNA11P29992 359 aa18.15■□□□□ 0.5
USP48-210ENST00000489108 HOXA11P31270 313 aaPredicted RBP18.15■□□□□ 0.5
USP48-210ENST00000489108 DHX32Q7L7V1 743 aaKnown RBP18.15■□□□□ 0.5
USP48-210ENST00000489108 COLGALT2Q8IYK4 626 aa18.15■□□□□ 0.5
USP48-210ENST00000489108 RNF168Q8IYW5 571 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms