RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 CFAP73A6NFT4 308 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 FAM86B1E9PN63 330 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 FAM86B2P0C5J1 330 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 SREBF1P36956 1147 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 RIPK1Q13546 671 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 SLMAPQ14BN4 828 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 CCDC63Q8NA47 563 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 DCAF4Q8WV16 495 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 C18orf8Q96DM3 657 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 PRMT1Q99873 361 aaKnown RBP21.02■□□□□ 0.96
HMG20B-213ENST00000488973 INTS2Q9H0H0 1204 aaKnown RBP21.02■□□□□ 0.96
HMG20B-213ENST00000488973 NOD2Q9HC29 1040 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 TAS2R14Q9NYV8 317 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.02■□□□□ 0.96
HMG20B-213ENST00000488973 UBR3Q6ZT12 1888 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 UBE4BO95155 1302 aa21.02■□□□□ 0.95
HMG20B-213ENST00000488973 FAM13AO94988 1023 aa21.02■□□□□ 0.95
HMG20B-213ENST00000488973 FOSP01100 380 aaPredicted RBP21.02■□□□□ 0.95
HMG20B-213ENST00000488973 RFX1P22670 979 aa21.02■□□□□ 0.95
HMG20B-213ENST00000488973 RPL21P46778 160 aaKnown RBP21.02■□□□□ 0.95
HMG20B-213ENST00000488973 CYP4A11Q02928 519 aa21.02■□□□□ 0.95
HMG20B-213ENST00000488973 TRPM8Q7Z2W7 1104 aa21.02■□□□□ 0.95
HMG20B-213ENST00000488973 PRELID2Q8N945 189 aa21.02■□□□□ 0.95
HMG20B-213ENST00000488973 EIF2AK1Q9BQI3 630 aaKnown RBP21.02■□□□□ 0.95
HMG20B-213ENST00000488973 SEMA4AQ9H3S1 761 aa21.02■□□□□ 0.95
HMG20B-213ENST00000488973 TMOD4Q9NZQ9 345 aa21.02■□□□□ 0.95
HMG20B-213ENST00000488973 MSH4O15457 936 aa21.01■□□□□ 0.95
HMG20B-213ENST00000488973 CIITAP33076 1130 aa21.01■□□□□ 0.95
HMG20B-213ENST00000488973 CBWD6Q4V339 395 aa21.01■□□□□ 0.95
HMG20B-213ENST00000488973 CBWD3Q5JTY5 395 aa21.01■□□□□ 0.95
HMG20B-213ENST00000488973 CBWD5Q5RIA9 395 aa21.01■□□□□ 0.95
HMG20B-213ENST00000488973 ZNF772Q68DY9 489 aaPredicted RBP21.01■□□□□ 0.95
HMG20B-213ENST00000488973 PRR5LQ6MZQ0 368 aa21.01■□□□□ 0.95
HMG20B-213ENST00000488973 CRELD2Q6UXH1 353 aaPredicted RBP21.01■□□□□ 0.95
HMG20B-213ENST00000488973 CCDC17Q96LX7 622 aa21.01■□□□□ 0.95
HMG20B-213ENST00000488973 SUGT1Q9Y2Z0 365 aa21.01■□□□□ 0.95
HMG20B-213ENST00000488973 PCDHA3Q9Y5H8 950 aa21.01■□□□□ 0.95
HMG20B-213ENST00000488973 CCNHP51946 323 aaPredicted RBP21■□□□□ 0.95
HMG20B-213ENST00000488973 E2F5Q15329 346 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 TAOK1Q7L7X3 1001 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 MKL1Q969V6 931 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 AGPAT1Q99943 283 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 ELAC2Q9BQ52 826 aaKnown RBP21■□□□□ 0.95
HMG20B-213ENST00000488973 SEPT11Q9NVA2 429 aaKnown RBP21■□□□□ 0.95
HMG20B-213ENST00000488973 BRWD3Q6RI45 1802 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 ALAS1P13196 640 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 RARGP13631 454 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 NMT1P30419 496 aaKnown RBP21■□□□□ 0.95
HMG20B-213ENST00000488973 CTTNQ14247 550 aaKnown RBP21■□□□□ 0.95
HMG20B-213ENST00000488973 CHADLQ6NUI6 762 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 TLDC1Q6P9B6 456 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 MYCT1Q8N699 235 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 TBC1D16Q8TBP0 767 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 RPS6KC1Q96S38 1066 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 ZSWIM1Q9BR11 485 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 DMAC2Q9NW81 257 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 POLLQ9UGP5 575 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 FRMD4BQ9Y2L6 1034 aa21■□□□□ 0.95
HMG20B-213ENST00000488973 SMIM23A6NLE4 172 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 SFI1A8K8P3 1242 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 RIPK2O43353 540 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 HLA-DOAP06340 250 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 CRY2Q49AN0 593 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 MFSD5Q6N075 450 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 PALB2Q86YC2 1186 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 RUNDC3BQ96NL0 473 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 AMNQ9BXJ7 453 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 TAOK3Q9H2K8 898 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 VIMP08670 466 aaKnown RBP20.99■□□□□ 0.95
HMG20B-213ENST00000488973 GTF2IP78347 998 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 MYL7Q01449 175 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 AADACL2Q6P093 401 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 CCDC137Q6PK04 289 aaKnown RBP20.99■□□□□ 0.95
HMG20B-213ENST00000488973 HS2ST1Q7LGA3 356 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 EPS8L3Q8TE67 593 aaKnown RBP20.99■□□□□ 0.95
HMG20B-213ENST00000488973 ROPN1BQ9BZX4 212 aaPredicted RBP20.99■□□□□ 0.95
HMG20B-213ENST00000488973 IKZF4Q9H2S9 585 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 ROPN1Q9HAT0 212 aaPredicted RBP20.99■□□□□ 0.95
HMG20B-213ENST00000488973 PARVGQ9HBI0 331 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 BAIAP2L1Q9UHR4 511 aa20.99■□□□□ 0.95
HMG20B-213ENST00000488973 RASGRF2O14827 1237 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 AUHQ13825 339 aaKnown RBP20.98■□□□□ 0.95
HMG20B-213ENST00000488973 CNGA2Q16280 664 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 ZC2HC1CQ53FD0 456 aaPredicted RBP20.98■□□□□ 0.95
HMG20B-213ENST00000488973 SLFN13Q68D06 897 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 TTC27Q6P3X3 843 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 C1orf186Q6ZWK4 172 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 MORC4Q8TE76 937 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 USP40Q9NVE5 1235 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 SEL1LQ9UBV2 794 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 RPS6KL1Q9Y6S9 549 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 SERPINB2P05120 415 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 NEFHP12036 1026 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 POLD1P28340 1107 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 PDE6CP51160 858 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 CYP1B1Q16678 543 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 ARHGAP44Q17R89 818 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 SEL1L2Q5TEA6 688 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 CYFIP1Q7L576 1253 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 KRT35Q92764 455 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms