RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 PHACTR1Q9C0D0 580 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 NT5C3AQ9H0P0 336 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 PIDD1Q9HB75 910 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 TMOD4Q9NZQ9 345 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 L3MBTL1Q9Y468 752 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 LTBP1Q14766 1721 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 CNTNAP1P78357 1384 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 CCDC169A6NNP5 214 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 DNM1LO00429 736 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 RPA1P27694 616 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 RXRBP28702 533 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 DHX9Q08211 1270 aaKnown RBP8.25□□□□□ -1.09
BEST3-205ENST00000488961 FSTL1Q12841 308 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 HLTFQ14527 1009 aaKnown RBP eCLIP8.25□□□□□ -1.09
BEST3-205ENST00000488961 PLCB4Q15147 1175 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 NBPF12Q5TAG4 269 aaPredicted RBP8.25□□□□□ -1.09
BEST3-205ENST00000488961 HAUS3Q68CZ6 603 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 TSHZ1Q6ZSZ6 1077 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 RETREG2Q8NC44 543 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 MAGEC3Q8TD91 643 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 ARL8AQ96BM9 186 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 CCDC43Q96MW1 224 aaKnown RBP8.25□□□□□ -1.09
BEST3-205ENST00000488961 TSC22D3Q99576 134 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 IDI2Q9BXS1 227 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 R3HDMLQ9H3Y0 253 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 ARHGEF10LQ9HCE6 1279 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 PLIN4Q96Q06 1357 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 GOLGA6L7A0A1B0GV03 622 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 GRID2IPA4D2P6 1211 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 EXOC3O60645 756 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 SREBF1P36956 1147 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 PEX3P56589 373 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 GUCY1A3Q02108 690 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 UBAP2Q5T6F2 1119 aaKnown RBP8.25□□□□□ -1.09
BEST3-205ENST00000488961 WDR93Q6P2C0 686 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 RSBN1LQ6PCB5 846 aaPredicted RBP8.25□□□□□ -1.09
BEST3-205ENST00000488961 FAM186BQ8IYM0 893 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 TTLL6Q8N841 843 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 SYT2Q8N9I0 419 aaPredicted RBP8.25□□□□□ -1.09
BEST3-205ENST00000488961 C7orf43Q8WVR3 580 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 SPIRE2Q8WWL2 714 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 DHX38Q92620 1227 aaKnown RBP8.25□□□□□ -1.09
BEST3-205ENST00000488961 ARHGEF26Q96DR7 871 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 PPP1R16BQ96T49 567 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 SLX1AQ9BQ83 275 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 GANQ9H2C0 597 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 NOD2Q9HC29 1040 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 KCNH7Q9NS40 1196 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 SERPINA10Q9UK55 444 aa8.25□□□□□ -1.09
BEST3-205ENST00000488961 HEXIM1O94992 359 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 AFPP02771 609 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 FLT3P36888 993 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 CD151P48509 253 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 MARCKSL1P49006 195 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 ROR2Q01974 943 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 ITGB3BPQ13352 177 aaPredicted RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 LRRC23Q53EV4 343 aaPredicted RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 FAM102BQ5T8I3 360 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 PAPD7Q5XG87 772 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 C8orf74Q6P047 294 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 ALKBH5Q6P6C2 394 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 CCDC121Q6ZUS5 278 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 ERMNQ8TAM6 284 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 SLC35C1Q96A29 364 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 RBM41Q96IZ5 413 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 NOX5Q96PH1 765 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 ALS2CR12Q96Q35 445 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 CORO1CQ9ULV4 474 aaPredicted RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 C15orf41Q9Y2V0 281 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 POLR2AP24928 1970 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 ZMYM2Q9UBW7 1377 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 KDM3AQ9Y4C1 1321 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 CYP3A7-CYP3A51PA0A087WV96 503 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 EVI5O60447 810 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 SMIM24O75264 130 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 ANP32DO95626 131 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 ATP6V1G2O95670 118 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 DLATP10515 647 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 HPDP32754 393 aaPredicted RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 USP11P51784 963 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 DBN1Q16643 649 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 CEP55Q53EZ4 464 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 TTMPQ5BVD1 217 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 MIER3Q7Z3K6 550 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 YTHDF3Q7Z739 585 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 DAAM2Q86T65 1068 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 SPATS2Q86XZ4 545 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 SLFN12Q8IYM2 578 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 SLC30A5Q8TAD4 765 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 CNKSR1Q969H4 720 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 MKL1Q969V6 931 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 MAGEF1Q9HAY2 307 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 DNAJC17Q9NVM6 304 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 DNAAF2Q9NVR5 837 aaKnown RBP8.24□□□□□ -1.09
BEST3-205ENST00000488961 CEP72Q9P209 647 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 TCEAL9Q9UHQ7 104 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 MYO3BQ8WXR4 1341 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 ARHGEF35A5YM69 484 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 GJC1P36383 396 aa8.24□□□□□ -1.09
BEST3-205ENST00000488961 CTCFP49711 727 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms