RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 KCNQ2O43526 872 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 C1RP00736 705 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 CXCR5P32302 372 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 PTTG1IPP53801 180 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 SEC24CP53992 1094 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 WNT3AP56704 352 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 KRTAP10-9P60411 292 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 ADCY2Q08462 1091 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 EPHA7Q15375 998 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 ZNF174Q15697 407 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 ZNF362Q5T0B9 420 aaPredicted RBP4.34□□□□□ -1.71
CCDC93-209ENST00000488908 DOK3Q7L591 496 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 FGD2Q7Z6J4 655 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 DDX53Q86TM3 631 aaKnown RBP4.34□□□□□ -1.71
CCDC93-209ENST00000488908 PLXDC1Q8IUK5 500 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 LINC00476Q8WZB0 136 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 HIST1H2AHQ96KK5 128 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 HIST1H2AJQ99878 128 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 MRPL4Q9BYD3 311 aaKnown RBP4.34□□□□□ -1.71
CCDC93-209ENST00000488908 MTG2Q9H4K7 406 aa4.34□□□□□ -1.71
CCDC93-209ENST00000488908 CCDC163A0A0D9SF12 145 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 B4E1Z4 1266 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 H7C1D1 291 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 M0R2C6 588 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 OPHN1O60890 802 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 ALDH1A2O94788 518 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 NDUFA10O95299 355 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 GAAP10253 952 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 BMPR1AP36894 532 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 BLOC1S1P78537 153 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 GUCY1B3Q02153 619 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 ADCY1Q08828 1119 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 BEAN1Q3B7T3 259 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 TIGD7Q6NT04 549 aaPredicted RBP4.33□□□□□ -1.72
CCDC93-209ENST00000488908 KANSL1Q7Z3B3 1105 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 PHYKPLQ8IUZ5 450 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 UNC5BQ8IZJ1 945 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 C7orf31Q8N865 590 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 KIAA1958Q8N8K9 716 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 BOLLQ8N9W6 283 aaKnown RBP4.33□□□□□ -1.72
CCDC93-209ENST00000488908 CHST14Q8NCH0 376 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 SIMC1Q8NDZ2 872 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 IL17RAQ96F46 866 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 NOL10Q9BSC4 688 aaKnown RBP4.33□□□□□ -1.72
CCDC93-209ENST00000488908 SPATA5L1Q9BVQ7 753 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 LSM14BQ9BX40 385 aaKnown RBP4.33□□□□□ -1.72
CCDC93-209ENST00000488908 SIRPGQ9P1W8 387 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 PPP1R1BQ9UD71 204 aaPredicted RBP4.33□□□□□ -1.72
CCDC93-209ENST00000488908 CLCA2Q9UQC9 943 aa4.33□□□□□ -1.72
CCDC93-209ENST00000488908 COL11A2P13942 1736 aaPredicted RBP4.32□□□□□ -1.72
CCDC93-209ENST00000488908 PIPSLA2A3N6 862 aa4.32□□□□□ -1.72
CCDC93-209ENST00000488908 DIRC3C9JPN6 131 aa4.32□□□□□ -1.72
CCDC93-209ENST00000488908 ZNF185O15231 689 aa4.32□□□□□ -1.72
CCDC93-209ENST00000488908 APOL3O95236 402 aa4.32□□□□□ -1.72
CCDC93-209ENST00000488908 CFBP00751 764 aa4.32□□□□□ -1.72
CCDC93-209ENST00000488908 CASRP41180 1078 aa4.32□□□□□ -1.72
CCDC93-209ENST00000488908 FOXI1Q12951 378 aa4.32□□□□□ -1.72
CCDC93-209ENST00000488908 MRPL49Q13405 166 aaKnown RBP4.32□□□□□ -1.72
CCDC93-209ENST00000488908 SOX7Q9BT81 388 aa4.32□□□□□ -1.72
CCDC93-209ENST00000488908 DKK2Q9UBU2 259 aa4.32□□□□□ -1.72
CCDC93-209ENST00000488908 CHST2Q9Y4C5 530 aa4.32□□□□□ -1.72
CCDC93-209ENST00000488908 POLR2AP24928 1970 aaKnown RBP4.32□□□□□ -1.72
CCDC93-209ENST00000488908 PTPDC1A2A3K4 754 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 PRR5-ARHGAP8B1AHC4 643 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 PRPF6O94906 941 aaKnown RBP4.31□□□□□ -1.72
CCDC93-209ENST00000488908 HLA-DOAP06340 250 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 HSP90B1P14625 803 aaKnown RBP4.31□□□□□ -1.72
CCDC93-209ENST00000488908 PTX3P26022 381 aaPredicted RBP4.31□□□□□ -1.72
CCDC93-209ENST00000488908 RANGAP1P46060 587 aaPredicted RBP4.31□□□□□ -1.72
CCDC93-209ENST00000488908 PTH2RP49190 550 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 GZMKP49863 264 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 DDB1Q16531 1140 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 ABHD17BQ5VST6 288 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 KIAA1841Q6NSI8 718 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 ZCCHC8Q6NZY4 707 aaKnown RBP4.31□□□□□ -1.72
CCDC93-209ENST00000488908 MICALCLQ6ZW33 695 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 FAM98AQ8NCA5 519 aaKnown RBP4.31□□□□□ -1.72
CCDC93-209ENST00000488908 CPEB3Q8NE35 698 aaKnown RBP4.31□□□□□ -1.72
CCDC93-209ENST00000488908 SLC9A6Q92581 669 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 TRIM39Q9HCM9 518 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 CABP5Q9NP86 173 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 SAMD15Q9P1V8 674 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 TESQ9UGI8 421 aaKnown RBP4.31□□□□□ -1.72
CCDC93-209ENST00000488908 FRMD4BQ9Y2L6 1034 aa4.31□□□□□ -1.72
CCDC93-209ENST00000488908 PROB1E7EW31 1015 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 LEFTY2O00292 366 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 GLRX3O76003 335 aaKnown RBP4.3□□□□□ -1.72
CCDC93-209ENST00000488908 SPATA31D3P0C874 917 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 DDX6P26196 483 aaKnown RBP eCLIP4.3□□□□□ -1.72
CCDC93-209ENST00000488908 RNASE9P60153 205 aaKnown RBP4.3□□□□□ -1.72
CCDC93-209ENST00000488908 NHLH2Q02577 135 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 SP5Q6BEB4 398 aaPredicted RBP4.3□□□□□ -1.72
CCDC93-209ENST00000488908 SPATA31D4Q6ZUB0 917 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 PIK3C3Q8NEB9 887 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 ZSWIM2Q8NEG5 633 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 PPP1R14CQ8TAE6 165 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 CAGE1Q8TC20 777 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 LRFN3Q9BTN0 628 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 MYL10Q9BUA6 226 aa4.3□□□□□ -1.72
CCDC93-209ENST00000488908 MYADML2A6NDP7 307 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms