RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CNPP09543 421 aaKnown RBP21.33■■□□□ 1
GGPS1-206ENST00000488594 FOXK2Q01167 660 aa21.33■■□□□ 1
GGPS1-206ENST00000488594 ELMSAN1Q6PJG2 1045 aa21.33■■□□□ 1
GGPS1-206ENST00000488594 ASCL5Q7RTU5 278 aa21.33■■□□□ 1
GGPS1-206ENST00000488594 PSPC1Q8WXF1 523 aaKnown RBP21.33■■□□□ 1
GGPS1-206ENST00000488594 DPP7Q9UHL4 492 aa21.33■■□□□ 1
GGPS1-206ENST00000488594 SSX2IPQ9Y2D8 614 aa21.33■■□□□ 1
GGPS1-206ENST00000488594 FAN1Q9Y2M0 1017 aa21.33■■□□□ 1
GGPS1-206ENST00000488594 MYO10Q9HD67 2058 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 PRR23AA6NEV1 266 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 DDHD2O94830 711 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 REC8O95072 547 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 RFC5P40937 340 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 PPP2R5CQ13362 524 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 LETM2Q2VYF4 491 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 PLA2G4FQ68DD2 849 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 CNNM3Q8NE01 707 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 FLCNQ8NFG4 579 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 FAM20AQ96MK3 541 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 UBN1Q9NPG3 1134 aa21.32■■□□□ 1
GGPS1-206ENST00000488594 GAS2O43903 313 aaKnown RBP21.31■■□□□ 1
GGPS1-206ENST00000488594 B4GALT3O60512 393 aa21.31■■□□□ 1
GGPS1-206ENST00000488594 LILRB3O75022 631 aa21.31■■□□□ 1
GGPS1-206ENST00000488594 CPLX2Q6PUV4 134 aaKnown RBP21.31■■□□□ 1
GGPS1-206ENST00000488594 CYP26C1Q6V0L0 522 aa21.31■■□□□ 1
GGPS1-206ENST00000488594 KRT25Q7Z3Z0 450 aa21.31■■□□□ 1
GGPS1-206ENST00000488594 CMASQ8NFW8 434 aaPredicted RBP21.31■■□□□ 1
GGPS1-206ENST00000488594 PRPF31Q8WWY3 499 aaKnown RBP21.31■■□□□ 1
GGPS1-206ENST00000488594 NKD2Q969F2 451 aaPredicted RBP21.31■■□□□ 1
GGPS1-206ENST00000488594 CEP170P1Q96L14 293 aa21.31■■□□□ 1
GGPS1-206ENST00000488594 DHX33Q9H6R0 707 aaKnown RBP21.31■■□□□ 1
GGPS1-206ENST00000488594 IGSF9Q9P2J2 1179 aa21.31■■□□□ 1
GGPS1-206ENST00000488594 DUSP12Q9UNI6 340 aa21.31■■□□□ 1
GGPS1-206ENST00000488594 PLXNA3P51805 1871 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 EML1O00423 815 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 SOD2P04179 222 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 SSBP05455 408 aaKnown RBP eCLIP21.3■■□□□ 1
GGPS1-206ENST00000488594 URODP06132 367 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 P4HBP07237 508 aaKnown RBP21.3■■□□□ 1
GGPS1-206ENST00000488594 NCLP19338 710 aaKnown RBP21.3■■□□□ 1
GGPS1-206ENST00000488594 AOC1P19801 751 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 NPEPPSP55786 919 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 PCBP1Q15365 356 aaKnown RBP eCLIP21.3■■□□□ 1
GGPS1-206ENST00000488594 CWF19L1Q69YN2 538 aaKnown RBP21.3■■□□□ 1
GGPS1-206ENST00000488594 RUFY3Q7L099 469 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 TCP11Q8WWU5 503 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 RHOBTB2Q9BYZ6 727 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 SLKQ9H2G2 1235 aaPredicted RBP21.3■■□□□ 1
GGPS1-206ENST00000488594 KCNK12Q9HB15 430 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 VAV3Q9UKW4 847 aa21.3■■□□□ 1
GGPS1-206ENST00000488594 PTPRZ1P23471 2315 aaPredicted RBP21.3■■□□□ 1
GGPS1-206ENST00000488594 CFAP54Q96N23 3096 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 NRP1O14786 923 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 ASAP2O43150 1006 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 SLC37A4O43826 429 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 POMCP01189 267 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 ADH1AP07327 375 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 SRGAP2CP0DJJ0 459 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 GCFC2P16383 781 aaKnown RBP21.29■■□□□ 1
GGPS1-206ENST00000488594 HOXA11P31270 313 aaPredicted RBP21.29■■□□□ 1
GGPS1-206ENST00000488594 LAMTOR4Q0VGL1 99 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 NPY5RQ15761 445 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 INF2Q27J81 1249 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 UBXN11Q5T124 520 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 STAMQ92783 540 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 TMEM143Q96AN5 459 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 ZNF274Q96GC6 653 aaPredicted RBP21.29■■□□□ 1
GGPS1-206ENST00000488594 RPS6KC1Q96S38 1066 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 RTP3Q9BQQ7 232 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 KCNMB3Q9NPA1 279 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 FBXL21Q9UKT6 434 aa21.29■■□□□ 1
GGPS1-206ENST00000488594 AFF1P51825 1210 aaKnown RBP21.28■■□□□ 1
GGPS1-206ENST00000488594 TOB2Q14106 344 aaPredicted RBP21.28■■□□□ 1
GGPS1-206ENST00000488594 PPP4R3AQ6IN85 833 aa21.28■■□□□ 1
GGPS1-206ENST00000488594 OTUD6AQ7L8S5 288 aa21.28■■□□□ 1
GGPS1-206ENST00000488594 DENND4AQ7Z401 1863 aa21.28■■□□□ 1
GGPS1-206ENST00000488594 C4orf19Q8IY42 314 aa21.28■■□□□ 1
GGPS1-206ENST00000488594 FEZF2Q8TBJ5 459 aa21.28■■□□□ 1
GGPS1-206ENST00000488594 HERC2P3Q9BVR0 1158 aa21.28■■□□□ 1
GGPS1-206ENST00000488594 MINDY3Q9H8M7 445 aa21.28■■□□□ 1
GGPS1-206ENST00000488594 ZSWIM6Q9HCJ5 1215 aa21.28■■□□□ 1
GGPS1-206ENST00000488594 MAN1C1Q9NR34 630 aa21.28■■□□□ 1
GGPS1-206ENST00000488594 TBX3O15119 743 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 ERLIN2O94905 339 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 ITGA4P13612 1032 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 NPR3P17342 541 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 AXLP30530 894 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 AK2P54819 239 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 FRMD5Q7Z6J6 570 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 NEK8Q86SG6 692 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 CCDC105Q8IYK2 499 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 ZNF579Q8NAF0 562 aaKnown RBP21.27■■□□□ 1
GGPS1-206ENST00000488594 RNF149Q8NC42 400 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 CCDC51Q96ER9 411 aa21.27■■□□□ 1
GGPS1-206ENST00000488594 NAP1L4Q99733 375 aaKnown RBP21.27■■□□□ 1
GGPS1-206ENST00000488594 CCDC194A0A1B0GVG4 234 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 C2CD2LO14523 706 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 INPPL1O15357 1258 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 TEX28O15482 410 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 EPB41L2O43491 1005 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms