RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 TSPAN1O60635 241 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 MED24O75448 989 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 SRGAP2BP0DMP2 458 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 GLRA2P23416 452 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 TECP42680 631 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 HAUS3Q68CZ6 603 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 NOTUMQ6P988 496 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 TMEM184AQ6ZMB5 413 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 AGMOQ6ZNB7 445 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 MCPH1Q8NEM0 835 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 URGCPQ8TCY9 931 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 TMEM169Q96HH4 297 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 EPHX3Q9H6B9 360 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 UPF2Q9HAU5 1272 aaKnown RBP25.67■■□□□ 1.7
CUL4A-209ENST00000488558 USO1O60763 962 aaKnown RBP25.66■■□□□ 1.7
CUL4A-209ENST00000488558 ZC3H11AO75152 810 aaKnown RBP eCLIP25.66■■□□□ 1.7
CUL4A-209ENST00000488558 NCLP19338 710 aaKnown RBP25.66■■□□□ 1.7
CUL4A-209ENST00000488558 FXR2P51116 673 aaKnown RBP eCLIP25.66■■□□□ 1.7
CUL4A-209ENST00000488558 MBTD1Q05BQ5 628 aa25.66■■□□□ 1.7
CUL4A-209ENST00000488558 NCBP1Q09161 790 aaKnown RBP25.66■■□□□ 1.7
CUL4A-209ENST00000488558 KCNC3Q14003 757 aa25.66■■□□□ 1.7
CUL4A-209ENST00000488558 SMC1AQ14683 1233 aaKnown RBP25.66■■□□□ 1.7
CUL4A-209ENST00000488558 POLR3FQ9H1D9 316 aaPredicted RBP25.66■■□□□ 1.7
CUL4A-209ENST00000488558 RSAD1Q9HA92 442 aa25.66■■□□□ 1.7
CUL4A-209ENST00000488558 UBN1Q9NPG3 1134 aa25.66■■□□□ 1.7
CUL4A-209ENST00000488558 BARX2Q9UMQ3 279 aaPredicted RBP25.66■■□□□ 1.7
CUL4A-209ENST00000488558 INPP5FQ9Y2H2 1132 aa25.66■■□□□ 1.7
CUL4A-209ENST00000488558 INO80B-WBP1J3KQ70 363 aa25.65■■□□□ 1.7
CUL4A-209ENST00000488558 PER2O15055 1255 aa25.65■■□□□ 1.7
CUL4A-209ENST00000488558 AMHR2Q16671 573 aa25.65■■□□□ 1.7
CUL4A-209ENST00000488558 LONRF3Q496Y0 759 aa25.65■■□□□ 1.7
CUL4A-209ENST00000488558 TMC7Q7Z402 723 aa25.65■■□□□ 1.7
CUL4A-209ENST00000488558 C4orf32Q8N8J7 132 aa25.65■■□□□ 1.7
CUL4A-209ENST00000488558 VN1R2Q8NFZ6 395 aa25.65■■□□□ 1.7
CUL4A-209ENST00000488558 NRDE2Q9H7Z3 1164 aa25.65■■□□□ 1.7
CUL4A-209ENST00000488558 KANSL3Q9P2N6 904 aa25.65■■□□□ 1.7
CUL4A-209ENST00000488558 HIDE1A8MVS5 230 aa25.64■■□□□ 1.7
CUL4A-209ENST00000488558 INPPL1O15357 1258 aa25.64■■□□□ 1.7
CUL4A-209ENST00000488558 RNASELQ05823 741 aaKnown RBP25.64■■□□□ 1.7
CUL4A-209ENST00000488558 BMS1Q14692 1282 aaKnown RBP25.64■■□□□ 1.7
CUL4A-209ENST00000488558 POTEGQ6S5H5 508 aa25.64■■□□□ 1.7
CUL4A-209ENST00000488558 IGSF21Q96ID5 467 aa25.64■■□□□ 1.7
CUL4A-209ENST00000488558 STK39Q9UEW8 545 aa25.64■■□□□ 1.7
CUL4A-209ENST00000488558 GALTP07902 379 aa25.63■■□□□ 1.69
CUL4A-209ENST00000488558 MRPL43Q8N983 215 aaKnown RBP25.63■■□□□ 1.69
CUL4A-209ENST00000488558 SMG8Q8ND04 991 aaKnown RBP25.63■■□□□ 1.69
CUL4A-209ENST00000488558 CSRNP2Q9H175 543 aa25.63■■□□□ 1.69
CUL4A-209ENST00000488558 IPPQ9Y573 584 aa25.63■■□□□ 1.69
CUL4A-209ENST00000488558 STK24Q9Y6E0 443 aa25.63■■□□□ 1.69
CUL4A-209ENST00000488558 ZMYM2Q9UBW7 1377 aa25.62■■□□□ 1.69
CUL4A-209ENST00000488558 C2orf71A6NGG8 1288 aa25.62■■□□□ 1.69
CUL4A-209ENST00000488558 NT5C1B-RDH14C9J2C7 533 aa25.62■■□□□ 1.69
CUL4A-209ENST00000488558 LAD1O00515 517 aa25.62■■□□□ 1.69
CUL4A-209ENST00000488558 ALADP13716 330 aa25.62■■□□□ 1.69
CUL4A-209ENST00000488558 MCM2P49736 904 aa25.62■■□□□ 1.69
CUL4A-209ENST00000488558 TOB1P50616 345 aaPredicted RBP25.62■■□□□ 1.69
CUL4A-209ENST00000488558 CDCA2Q69YH5 1023 aaPredicted RBP25.62■■□□□ 1.69
CUL4A-209ENST00000488558 DDX53Q86TM3 631 aaKnown RBP25.62■■□□□ 1.69
CUL4A-209ENST00000488558 TMEM173Q86WV6 379 aaPredicted RBP25.62■■□□□ 1.69
CUL4A-209ENST00000488558 PRIMPOLQ96LW4 560 aa25.62■■□□□ 1.69
CUL4A-209ENST00000488558 TMEM175Q9BSA9 504 aa25.62■■□□□ 1.69
CUL4A-209ENST00000488558 ZBP1Q9H171 429 aa25.62■■□□□ 1.69
CUL4A-209ENST00000488558 IRAK3Q9Y616 596 aa25.62■■□□□ 1.69
CUL4A-209ENST00000488558 A0A087WWV3 80 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 GPR37L1O60883 481 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 ITGA4P13612 1032 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 ARF4P18085 180 aaPredicted RBP25.61■■□□□ 1.69
CUL4A-209ENST00000488558 COL9A1P20849 921 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 SLC11A1P49279 550 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 GIT2Q14161 759 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 PDIA5Q14554 519 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 NBR1Q14596 966 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 TMEM31Q5JXX7 168 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 PPP4R3CPQ6ZMV5 832 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 IGSF22Q8N9C0 903 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 TMX3Q96JJ7 454 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 EIF2AQ9BY44 585 aaKnown RBP25.61■■□□□ 1.69
CUL4A-209ENST00000488558 RAB34Q9BZG1 259 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 GPRC5CQ9NQ84 441 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 DNAJB4Q9UDY4 337 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 LRWD1Q9UFC0 647 aa25.61■■□□□ 1.69
CUL4A-209ENST00000488558 USP15Q9Y4E8 981 aaPredicted RBP25.61■■□□□ 1.69
CUL4A-209ENST00000488558 ARHGEF35A5YM69 484 aa25.6■■□□□ 1.69
CUL4A-209ENST00000488558 CYP11B2P19099 503 aa25.6■■□□□ 1.69
CUL4A-209ENST00000488558 RBM10P98175 930 aaKnown RBP25.6■■□□□ 1.69
CUL4A-209ENST00000488558 PADI6Q6TGC4 694 aa25.6■■□□□ 1.69
CUL4A-209ENST00000488558 ZNF280BQ86YH2 543 aa25.6■■□□□ 1.69
CUL4A-209ENST00000488558 HACE1Q8IYU2 909 aa25.6■■□□□ 1.69
CUL4A-209ENST00000488558 VPS52Q8N1B4 723 aa25.6■■□□□ 1.69
CUL4A-209ENST00000488558 SUSD6Q92537 303 aa25.6■■□□□ 1.69
CUL4A-209ENST00000488558 CPB2Q96IY4 423 aa25.6■■□□□ 1.69
CUL4A-209ENST00000488558 PRMT7Q9NVM4 692 aaPredicted RBP25.6■■□□□ 1.69
CUL4A-209ENST00000488558 TDRD15B5MCY1 1934 aaKnown RBP25.59■■□□□ 1.69
CUL4A-209ENST00000488558 LRRIQ4A6NIV6 560 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 DCXO43602 365 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 B4GALT3O60512 393 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 CTSAP10619 480 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 HOXB8P17481 243 aaPredicted RBP25.59■■□□□ 1.69
CUL4A-209ENST00000488558 CCT6AP40227 531 aaKnown RBP25.59■■□□□ 1.69
CUL4A-209ENST00000488558 PRPHP41219 470 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms