RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 NOTUMQ6P988 496 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 RNF169Q8NCN4 708 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 KCNG4Q8TDN1 519 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 GDPD5Q8WTR4 605 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 CCDC51Q96ER9 411 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 FZD8Q9H461 694 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 PRMT7Q9NVM4 692 aaPredicted RBP17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 CCDC39Q9UFE4 941 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 CFAP45Q9UL16 551 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 TTLL13PA6NNM8 815 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 TBKBP1A7MCY6 615 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 MEIS3P2A8K0S8 358 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 SFI1A8K8P3 1242 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 LPXNO60711 386 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 CUTAO60888 179 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 EOMESO95936 686 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 PRKCBP05771 671 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 NPTX2P47972 431 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 PEX3P56589 373 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 DHX8Q14562 1220 aaKnown RBP17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 EPC2Q52LR7 807 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 TMEM192Q8IY95 271 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 CLP1Q92989 425 aaKnown RBP17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 LPPQ93052 612 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 PRIMPOLQ96LW4 560 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 SAMD11Q96NU1 681 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 GAS2L1Q99501 681 aaPredicted RBP17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 REEP2Q9BRK0 252 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 EIF2AQ9BY44 585 aaKnown RBP17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 TMEM117Q9H0C3 514 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 HCSTQ9UBK5 93 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 PCDHB2Q9Y5E7 798 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 MYH11P35749 1972 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 PHLPP2Q6ZVD8 1323 aa17.67■□□□□ 0.42
ERGIC3-216ENST00000488384 HOXA2O43364 376 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 ZNF623O75123 536 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 SKIP12755 728 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 CTNNB1P35222 781 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 MAPK6Q16659 721 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 RRAGBQ5VZM2 374 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 SHC4Q6S5L8 630 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 CCDC73Q6ZRK6 1079 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 FBXO22Q8NEZ5 403 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 HELQQ8TDG4 1101 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 CASD1Q96PB1 797 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 C17orf75Q9HAS0 396 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 ARHGAP28Q9P2N2 729 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 RCOR1Q9UKL0 485 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 ODF2LQ9ULJ1 636 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 PCDHA7Q9UN72 937 aa17.66■□□□□ 0.42
ERGIC3-216ENST00000488384 A0A1B0GUA9 196 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 CCDC169A6NNP5 214 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 PLS3P13797 630 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 LIG1P18858 919 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 STAT6P42226 847 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 ME1P48163 572 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 EFNA5P52803 228 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 KRT85P78386 507 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 NCBP1Q09161 790 aaKnown RBP17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 LONRF3Q496Y0 759 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 TAS1R3Q7RTX0 852 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 MRPL10Q7Z7H8 261 aaKnown RBP17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 CDR2LQ86X02 465 aaPredicted RBP17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 SMG8Q8ND04 991 aaKnown RBP17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 SPIRE2Q8WWL2 714 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 PRDM6Q9NQX0 595 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 USP20Q9Y2K6 914 aa17.65■□□□□ 0.42
ERGIC3-216ENST00000488384 C5orf67F2Z3F1 127 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 ACKR2O00590 384 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 NCLP19338 710 aaKnown RBP17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 BMPR1AP36894 532 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 ZNF131P52739 623 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 PRPF4BQ13523 1007 aaKnown RBP17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 GIT2Q14161 759 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 E2F4Q16254 413 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 SLC27A1Q6PCB7 646 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 AGMOQ6ZNB7 445 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 LRRC55Q6ZSA7 311 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 ABI1Q8IZP0 508 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 LRRC43Q8N309 656 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 PDILTQ8N807 584 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 LEO1Q8WVC0 666 aaPredicted RBP17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 PANK2Q9BZ23 570 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 NXF3Q9H4D5 531 aaKnown RBP17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 PDZD7Q9H5P4 517 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 KMT5AQ9NQR1 393 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 RWDD3Q9Y3V2 267 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 IPPQ9Y573 584 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 ATP6V1DQ9Y5K8 247 aa17.64■□□□□ 0.41
ERGIC3-216ENST00000488384 SLC16A4O15374 487 aa17.63■□□□□ 0.41
ERGIC3-216ENST00000488384 NPTXRO95502 500 aa17.63■□□□□ 0.41
ERGIC3-216ENST00000488384 KRT18P05783 430 aaKnown RBP17.63■□□□□ 0.41
ERGIC3-216ENST00000488384 NT5DC1Q5TFE4 455 aa17.63■□□□□ 0.41
ERGIC3-216ENST00000488384 TMEM161BQ8NDZ6 487 aa17.63■□□□□ 0.41
ERGIC3-216ENST00000488384 PGBD4Q96DM1 585 aa17.63■□□□□ 0.41
ERGIC3-216ENST00000488384 NTPCRQ9BSD7 190 aaKnown RBP17.63■□□□□ 0.41
ERGIC3-216ENST00000488384 TMEM134Q9H6X4 195 aa17.63■□□□□ 0.41
ERGIC3-216ENST00000488384 CWH43Q9H720 699 aa17.63■□□□□ 0.41
ERGIC3-216ENST00000488384 TYW1Q9NV66 732 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms