RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 TFDP1Q14186 410 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 EMC2Q15006 297 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 XKR9Q5GH70 373 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 NCAPH2Q6IBW4 605 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 SYCE2Q6PIF2 218 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 ELMSAN1Q6PJG2 1045 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 HACE1Q8IYU2 909 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 PRPF31Q8WWY3 499 aaKnown RBP12.54□□□□□ -0.4
VAMP7-206ENST00000488344 IGSF21Q96ID5 467 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 FBXL18Q96ME1 805 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 FAM193BQ96PV7 902 aaPredicted RBP12.54□□□□□ -0.4
VAMP7-206ENST00000488344 ZBP1Q9H171 429 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 ADAM7Q9H2U9 754 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 RSAD1Q9HA92 442 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 IFT122Q9HBG6 1241 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 TBC1D13Q9NVG8 400 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 PCDHB2Q9Y5E7 798 aa12.54□□□□□ -0.4
VAMP7-206ENST00000488344 NT5C1B-RDH14C9J2C7 533 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 CLASP2O75122 1294 aaKnown RBP12.53□□□□□ -0.4
VAMP7-206ENST00000488344 OFD1O75665 1012 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 SRGAP2CP0DJJ0 459 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 PTPN5P54829 565 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 KSR1Q8IVT5 923 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 FBXL6Q8N531 539 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 RNF149Q8NC42 400 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 HAS1Q92839 578 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 LPPQ93052 612 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 TMEM143Q96AN5 459 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 MTRQ99707 1265 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 TMEM175Q9BSA9 504 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 EMILIN2Q9BXX0 1053 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 NRDE2Q9H7Z3 1164 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 DPP7Q9UHL4 492 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 PCDHA12Q9UN75 941 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 SSX2IPQ9Y2D8 614 aa12.53□□□□□ -0.4
VAMP7-206ENST00000488344 FNDC1Q4ZHG4 1894 aaPredicted RBP12.53□□□□□ -0.4
VAMP7-206ENST00000488344 ATG2AQ2TAZ0 1938 aa12.52□□□□□ -0.4
VAMP7-206ENST00000488344 MYH9P35579 1960 aaKnown RBP12.52□□□□□ -0.4
VAMP7-206ENST00000488344 NR1I2O75469 434 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 DGAT1O75907 488 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 LYPLA2O95372 231 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 ALDH2P05091 517 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 GALTP07902 379 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 AK2P54819 239 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 NHLH1Q02575 133 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 POU5F1BQ06416 359 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 CALCRLQ16602 461 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 ATAT1Q5SQI0 421 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 NOTUMQ6P988 496 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 MRPL10Q7Z7H8 261 aaKnown RBP12.52□□□□□ -0.41
VAMP7-206ENST00000488344 FERMT3Q86UX7 667 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 UBALD2Q8IYN6 164 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 OXER1Q8TDS5 423 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 DYDC2Q96IM9 177 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 APOL5Q9BWW9 433 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 GBP3Q9H0R5 595 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 IRF2BPLQ9H1B7 796 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 TSHZ2Q9NRE2 1034 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 ANKEF1Q9NU02 776 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 RGL1Q9NZL6 768 aa12.52□□□□□ -0.41
VAMP7-206ENST00000488344 PLXNA4Q9HCM2 1894 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 ITGA4P13612 1032 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 NCLP19338 710 aaKnown RBP12.51□□□□□ -0.41
VAMP7-206ENST00000488344 SLC11A1P49279 550 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 CYP4A11Q02928 519 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 SPIRE1Q08AE8 756 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 MTMR3Q13615 1198 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 LONRF3Q496Y0 759 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 KIAA1841Q6NSI8 718 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 AGMOQ6ZNB7 445 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 CABP7Q86V35 215 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 TPH2Q8IWU9 490 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 TDRD5Q8NAT2 981 aaKnown RBP12.51□□□□□ -0.41
VAMP7-206ENST00000488344 GTF3C6Q969F1 213 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 EIF2AK1Q9BQI3 630 aaKnown RBP12.51□□□□□ -0.41
VAMP7-206ENST00000488344 SFXN1Q9H9B4 322 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 MRPL17Q9NRX2 175 aaKnown RBP12.51□□□□□ -0.41
VAMP7-206ENST00000488344 WRAP73Q9P2S5 460 aaPredicted RBP12.51□□□□□ -0.41
VAMP7-206ENST00000488344 DAXXQ9UER7 740 aaPredicted RBP12.51□□□□□ -0.41
VAMP7-206ENST00000488344 SORCS3Q9UPU3 1222 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 USTQ9Y2C2 406 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 FAN1Q9Y2M0 1017 aa12.51□□□□□ -0.41
VAMP7-206ENST00000488344 LOXHD1Q8IVV2 1947 aa12.5□□□□□ -0.41
VAMP7-206ENST00000488344 EVPLQ92817 2033 aa12.5□□□□□ -0.41
VAMP7-206ENST00000488344 INO80B-WBP1J3KQ70 363 aa12.5□□□□□ -0.41
VAMP7-206ENST00000488344 NEMFO60524 1076 aa12.5□□□□□ -0.41
VAMP7-206ENST00000488344 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
VAMP7-206ENST00000488344 URODP06132 367 aa12.5□□□□□ -0.41
VAMP7-206ENST00000488344 HOXA11P31270 313 aaPredicted RBP12.5□□□□□ -0.41
VAMP7-206ENST00000488344 PTENP60484 403 aa12.5□□□□□ -0.41
VAMP7-206ENST00000488344 NR5A1Q13285 461 aa12.5□□□□□ -0.41
VAMP7-206ENST00000488344 CTTNQ14247 550 aaKnown RBP12.5□□□□□ -0.41
VAMP7-206ENST00000488344 SAFBQ15424 915 aaKnown RBP eCLIP12.5□□□□□ -0.41
VAMP7-206ENST00000488344 PTPN14Q15678 1187 aa12.5□□□□□ -0.41
VAMP7-206ENST00000488344 RARS2Q5T160 578 aaKnown RBP12.5□□□□□ -0.41
VAMP7-206ENST00000488344 ALYREFQ86V81 257 aaKnown RBP12.5□□□□□ -0.41
VAMP7-206ENST00000488344 TMEM173Q86WV6 379 aaPredicted RBP12.5□□□□□ -0.41
VAMP7-206ENST00000488344 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms