RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 RBM46Q8TBY0 533 aaKnown RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 SLC7A3Q8WY07 619 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 DCPSQ96C86 337 aaKnown RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 ZFP91Q96JP5 570 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 FAM167AQ96KS9 214 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 JPH2Q9BR39 696 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 CAPS2Q9BXY5 557 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 FGFBP2Q9BYJ0 223 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 POLR3FQ9H1D9 316 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 WNT8AQ9H1J5 351 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 TAF1DQ9H5J8 278 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 TMEM8AQ9HCN3 771 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 ZNF302Q9NR11 478 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 RBM12Q9NTZ6 932 aaKnown RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 FBXO28Q9NVF7 368 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 GABBR1Q9UBS5 961 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 TBX20Q9UMR3 447 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 CEP83Q9Y592 693 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 RGPD3A6NKT7 1758 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 RGPD4Q7Z3J3 1758 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 ADAMTSL1Q8N6G6 1762 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 IGSF9BQ9UPX0 1349 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 FAM187AA6NFU0 413 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 HMGB1P1B2RPK0 211 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 VWA5AO00534 786 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 NOP56O00567 594 aaKnown RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 ZC3H11AO75152 810 aaKnown RBP eCLIP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 SASH3O75995 380 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 ABL1P00519 1130 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 NR3C2P08235 984 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 SLURP2P0DP57 97 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 CTNNA1P35221 906 aaKnown RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 AP3M2P53677 418 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 GALCP54803 685 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 JAM2P57087 298 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 DR1Q01658 176 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 MAP2K1Q02750 393 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 BAATQ14032 418 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 DHX34Q14147 1143 aaKnown RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 TFDP1Q14186 410 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 KIF22Q14807 665 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 SNRNP35Q16560 246 aaKnown RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 ASTE1Q2TB18 679 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 B4GALNT4Q76KP1 1039 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 APBB1IPQ7Z5R6 666 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 GLYCTKQ8IVS8 523 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 FBXL13Q8NEE6 735 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 SLC35G2Q8TBE7 412 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 TMC2Q8TDI7 906 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 AENQ8WTP8 325 aaKnown RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 TCP11Q8WWU5 503 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 CCDC127Q96BQ5 260 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 ZNF653Q96CK0 615 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 GDAP1L1Q96MZ0 367 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 TEX13BQ9BXU2 312 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 DEFB129Q9H1M3 183 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 ST7Q9NRC1 585 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 FEZ2Q9UHY8 353 aaPredicted RBP2.86□□□□□ -1.95
C9orf72-205ENST00000488117 NFU1Q9UMS0 254 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 PPME1Q9Y570 386 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 NFASCO94856 1347 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 PASKQ96RG2 1323 aa2.86□□□□□ -1.95
C9orf72-205ENST00000488117 GOLGA8IPA6NC78 632 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 GOLGA8JA6NMD2 632 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 ZNF263O14978 683 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 FANCGO15287 622 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 TGFB1I1O43294 461 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 FGGP02679 453 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 DLATP10515 647 aaKnown RBP2.85□□□□□ -1.95
C9orf72-205ENST00000488117 OSBPP22059 807 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 DSG3P32926 999 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 RFC5P40937 340 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 NSFP46459 744 aaKnown RBP2.85□□□□□ -1.95
C9orf72-205ENST00000488117 IREB2P48200 963 aaKnown RBP2.85□□□□□ -1.95
C9orf72-205ENST00000488117 RARRES1P49788 294 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 NCKAP1LP55160 1127 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 EIF3BP55884 814 aaKnown RBP2.85□□□□□ -1.95
C9orf72-205ENST00000488117 ZNF280AP59817 542 aaPredicted RBP2.85□□□□□ -1.95
C9orf72-205ENST00000488117 TRPC3Q13507 836 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 RRP1BQ14684 758 aaKnown RBP2.85□□□□□ -1.95
C9orf72-205ENST00000488117 MTERF2Q49AM1 385 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 XKR3Q5GH77 459 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 SWSAP1Q6NVH7 229 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 GADL1Q6ZQY3 521 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 ZNF677Q86XU0 584 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 CCDC50Q8IVM0 306 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 KSR1Q8IVT5 923 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 GSPT2Q8IYD1 628 aaKnown RBP2.85□□□□□ -1.95
C9orf72-205ENST00000488117 EIF1ADQ8N9N8 165 aaKnown RBP2.85□□□□□ -1.95
C9orf72-205ENST00000488117 BBOF1Q8ND07 529 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 SPIRE2Q8WWL2 714 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 DHX38Q92620 1227 aaKnown RBP2.85□□□□□ -1.95
C9orf72-205ENST00000488117 ATG4CQ96DT6 458 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 MS4A14Q96JA4 679 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 GMLQ99445 158 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 SENP7Q9BQF6 1050 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 PDCD2LQ9BRP1 358 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 TLR10Q9BXR5 811 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 ISCUQ9H1K1 167 aa2.85□□□□□ -1.95
C9orf72-205ENST00000488117 POLD4Q9HCU8 107 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms