RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 ZC3H11AO75152 810 aaKnown RBP eCLIP26.25■■□□□ 1.79
RNF38-208ENST00000488058 OFD1O75665 1012 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 EYA4O95677 639 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 PPM1AP35813 382 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 AMHR2Q16671 573 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 TMEM132AQ24JP5 1023 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 AGMOQ6ZNB7 445 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 MRPL10Q7Z7H8 261 aaKnown RBP26.25■■□□□ 1.79
RNF38-208ENST00000488058 RBM23Q86U06 439 aaKnown RBP26.25■■□□□ 1.79
RNF38-208ENST00000488058 CDR2LQ86X02 465 aaPredicted RBP26.25■■□□□ 1.79
RNF38-208ENST00000488058 DEPTORQ8TB45 409 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 URGCPQ8TCY9 931 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 MRPS27Q92552 414 aaKnown RBP26.25■■□□□ 1.79
RNF38-208ENST00000488058 CCDC51Q96ER9 411 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 NECAB3Q96P71 396 aaPredicted RBP26.25■■□□□ 1.79
RNF38-208ENST00000488058 PLIN2Q99541 437 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 MMTAG2Q9BU76 263 aaKnown RBP26.25■■□□□ 1.79
RNF38-208ENST00000488058 APOL6Q9BWW8 343 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 TRIM6Q9C030 488 aaPredicted RBP26.25■■□□□ 1.79
RNF38-208ENST00000488058 CSRNP2Q9H175 543 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 TBC1D13Q9NVG8 400 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 SPG21Q9NZD8 308 aa26.25■■□□□ 1.79
RNF38-208ENST00000488058 PUF60Q9UHX1 559 aaKnown RBP26.25■■□□□ 1.79
RNF38-208ENST00000488058 NT5C1B-RDH14C9J2C7 533 aa26.24■■□□□ 1.79
RNF38-208ENST00000488058 ITGA4P13612 1032 aa26.24■■□□□ 1.79
RNF38-208ENST00000488058 NCLP19338 710 aaKnown RBP26.24■■□□□ 1.79
RNF38-208ENST00000488058 BCAR1P56945 870 aa26.24■■□□□ 1.79
RNF38-208ENST00000488058 KRT17Q04695 432 aa26.24■■□□□ 1.79
RNF38-208ENST00000488058 PPP2R5AQ15172 486 aa26.24■■□□□ 1.79
RNF38-208ENST00000488058 ARL6IP4Q66PJ3 421 aaKnown RBP26.24■■□□□ 1.79
RNF38-208ENST00000488058 SMG8Q8ND04 991 aaKnown RBP26.24■■□□□ 1.79
RNF38-208ENST00000488058 CNNM3Q8NE01 707 aa26.24■■□□□ 1.79
RNF38-208ENST00000488058 CDK5RAP3Q96JB5 506 aa26.24■■□□□ 1.79
RNF38-208ENST00000488058 IFT74Q96LB3 600 aa26.24■■□□□ 1.79
RNF38-208ENST00000488058 C2orf40Q9H1Z8 148 aa26.24■■□□□ 1.79
RNF38-208ENST00000488058 PRMT7Q9NVM4 692 aaPredicted RBP26.24■■□□□ 1.79
RNF38-208ENST00000488058 IPPQ9Y573 584 aa26.24■■□□□ 1.79
RNF38-208ENST00000488058 CNTNAP2Q9UHC6 1331 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 NCK2O43639 380 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 SYT1P21579 422 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 NAMPTP43490 491 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 NRIP1P48552 1158 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 ALDH7A1P49419 539 aaKnown RBP26.23■■□□□ 1.79
RNF38-208ENST00000488058 ERVFC1P60507 584 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 PLCB3Q01970 1234 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 LEXMQ3ZCV2 418 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 PLPP4Q5VZY2 271 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 CDCA2Q69YH5 1023 aaPredicted RBP26.23■■□□□ 1.79
RNF38-208ENST00000488058 KCNK18Q7Z418 384 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 SLC39A11Q8N1S5 342 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 RSPH1Q8WYR4 309 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 INTS4Q96HW7 963 aaKnown RBP26.23■■□□□ 1.79
RNF38-208ENST00000488058 ENTPD7Q9NQZ7 604 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 HES2Q9Y543 173 aa26.23■■□□□ 1.79
RNF38-208ENST00000488058 LINC01565O15544 149 aa26.22■■□□□ 1.79
RNF38-208ENST00000488058 NPTXRO95502 500 aa26.22■■□□□ 1.79
RNF38-208ENST00000488058 SSBP05455 408 aaKnown RBP eCLIP26.22■■□□□ 1.79
RNF38-208ENST00000488058 SF3A1Q15459 793 aaKnown RBP26.22■■□□□ 1.79
RNF38-208ENST00000488058 KIFAP3Q92845 792 aa26.22■■□□□ 1.79
RNF38-208ENST00000488058 KIFC3Q9BVG8 833 aa26.22■■□□□ 1.79
RNF38-208ENST00000488058 NRDE2Q9H7Z3 1164 aa26.22■■□□□ 1.79
RNF38-208ENST00000488058 LZTS1Q9Y250 596 aa26.22■■□□□ 1.79
RNF38-208ENST00000488058 BRWD1Q9NSI6 2320 aa26.22■■□□□ 1.79
RNF38-208ENST00000488058 BMP15O95972 392 aa26.21■■□□□ 1.79
RNF38-208ENST00000488058 MAPK6Q16659 721 aa26.21■■□□□ 1.79
RNF38-208ENST00000488058 SLC27A1Q6PCB7 646 aa26.21■■□□□ 1.79
RNF38-208ENST00000488058 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.21■■□□□ 1.79
RNF38-208ENST00000488058 PNMA5Q96PV4 448 aa26.21■■□□□ 1.79
RNF38-208ENST00000488058 FAM193BQ96PV7 902 aaPredicted RBP26.21■■□□□ 1.79
RNF38-208ENST00000488058 TCF25Q9BQ70 676 aa26.21■■□□□ 1.79
RNF38-208ENST00000488058 TLE6Q9H808 572 aa26.21■■□□□ 1.79
RNF38-208ENST00000488058 POMCP01189 267 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 PRKCBP05771 671 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 CA8P35219 290 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 AFF1P51825 1210 aaKnown RBP26.2■■□□□ 1.78
RNF38-208ENST00000488058 COL19A1Q14993 1142 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 CLUL1Q15846 466 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 PTCRAQ6ISU1 281 aaPredicted RBP26.2■■□□□ 1.78
RNF38-208ENST00000488058 PPP4R3CPQ6ZMV5 832 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 CABP7Q86V35 215 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 HACE1Q8IYU2 909 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 TMEM169Q96HH4 297 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 PRIMPOLQ96LW4 560 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 RUSC1Q9BVN2 902 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 NT5C3AQ9H0P0 336 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 RNF39Q9H2S5 420 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 FZD8Q9H461 694 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 NXF3Q9H4D5 531 aaKnown RBP26.2■■□□□ 1.78
RNF38-208ENST00000488058 UBN1Q9NPG3 1134 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 DNAJB4Q9UDY4 337 aa26.2■■□□□ 1.78
RNF38-208ENST00000488058 A0A0C4DFX4 3053 aa26.19■■□□□ 1.78
RNF38-208ENST00000488058 PER2O15055 1255 aa26.19■■□□□ 1.78
RNF38-208ENST00000488058 HIP1RO75146 1068 aa26.19■■□□□ 1.78
RNF38-208ENST00000488058 MLH1P40692 756 aa26.19■■□□□ 1.78
RNF38-208ENST00000488058 NDUFV1P49821 464 aa26.19■■□□□ 1.78
RNF38-208ENST00000488058 PRPF4BQ13523 1007 aaKnown RBP26.19■■□□□ 1.78
RNF38-208ENST00000488058 PDE12Q6L8Q7 609 aaKnown RBP26.19■■□□□ 1.78
RNF38-208ENST00000488058 TMC7Q7Z402 723 aa26.19■■□□□ 1.78
RNF38-208ENST00000488058 ZNF280BQ86YH2 543 aa26.19■■□□□ 1.78
RNF38-208ENST00000488058 GAD1Q99259 594 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms