RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 MROH9Q5TGP6 573 aa4.35□□□□□ -1.71
HFM1-208ENST00000488023 JAKMIP3Q5VZ66 844 aa4.35□□□□□ -1.71
HFM1-208ENST00000488023 FSTL4Q6MZW2 842 aa4.35□□□□□ -1.71
HFM1-208ENST00000488023 RASSF3Q86WH2 238 aa4.35□□□□□ -1.71
HFM1-208ENST00000488023 PTRH1Q86Y79 214 aaKnown RBP4.35□□□□□ -1.71
HFM1-208ENST00000488023 MYLK4Q86YV6 388 aaPredicted RBP4.35□□□□□ -1.71
HFM1-208ENST00000488023 SMARCC2Q8TAQ2 1214 aa4.35□□□□□ -1.71
HFM1-208ENST00000488023 SEC14L1Q92503 715 aa4.35□□□□□ -1.71
HFM1-208ENST00000488023 PGBD4Q96DM1 585 aa4.35□□□□□ -1.71
HFM1-208ENST00000488023 FAM193BQ96PV7 902 aaPredicted RBP4.35□□□□□ -1.71
HFM1-208ENST00000488023 FAM204AQ9H8W3 233 aa4.35□□□□□ -1.71
HFM1-208ENST00000488023 IPPKQ9H8X2 491 aa4.35□□□□□ -1.71
HFM1-208ENST00000488023 PPARGC1AQ9UBK2 798 aaKnown RBP4.35□□□□□ -1.71
HFM1-208ENST00000488023 NOC2LQ9Y3T9 749 aaKnown RBP4.35□□□□□ -1.71
HFM1-208ENST00000488023 C22orf46C9J442 243 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 DVL2O14641 736 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 POU2F2P09086 479 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 OSMP13725 252 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 IL6STP40189 918 aaPredicted RBP4.34□□□□□ -1.71
HFM1-208ENST00000488023 BCL6P41182 706 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 ST5P78524 1137 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 GPSM2P81274 684 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 SMAD3P84022 425 aaKnown RBP4.34□□□□□ -1.71
HFM1-208ENST00000488023 SEMA5AQ13591 1074 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 SMAD2Q15796 467 aaKnown RBP4.34□□□□□ -1.71
HFM1-208ENST00000488023 TTLL7Q6ZT98 887 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 SUGP1Q8IWZ8 645 aaKnown RBP4.34□□□□□ -1.71
HFM1-208ENST00000488023 MIER2Q8N344 545 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 CAMKK1Q8N5S9 505 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.34□□□□□ -1.712e-6■■□□□ 13.8
HFM1-208ENST00000488023 ADAMTS17Q8TE56 1095 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 CCT6BQ92526 530 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 ELF4Q99607 663 aaPredicted RBP4.34□□□□□ -1.71
HFM1-208ENST00000488023 WDR12Q9GZL7 423 aaKnown RBP4.34□□□□□ -1.71
HFM1-208ENST00000488023 CSRNP2Q9H175 543 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 JADE2Q9NQC1 790 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 CDC23Q9UJX2 597 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 PCDHA2Q9Y5H9 948 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 X6R8D5 127 aa4.34□□□□□ -1.71
HFM1-208ENST00000488023 hCG_1984214I3L0E3 225 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 KCNK3O14649 394 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 HRGP04196 525 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 MAPK9P45984 424 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 PRIM2P49643 509 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 SRSF2Q01130 221 aaKnown RBP4.33□□□□□ -1.72
HFM1-208ENST00000488023 HNRNPA0Q13151 305 aaKnown RBP4.33□□□□□ -1.72
HFM1-208ENST00000488023 LSAMPQ13449 338 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 TOMM20Q15388 145 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 CCDC184Q52MB2 194 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 HABP4Q5JVS0 413 aaKnown RBP4.33□□□□□ -1.72
HFM1-208ENST00000488023 CRIP3Q6Q6R5 217 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 MAATS1Q7Z4T9 603 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 COL23A1Q86Y22 540 aaPredicted RBP4.33□□□□□ -1.72
HFM1-208ENST00000488023 NGDNQ8NEJ9 315 aaKnown RBP4.33□□□□□ -1.72
HFM1-208ENST00000488023 FBXW5Q969U6 566 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 RIPOR3Q96MK2 946 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 MAP3K14Q99558 947 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 TOMM22Q9NS69 142 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 DNAJC28Q9NX36 388 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 BTG4Q9NY30 223 aa4.33□□□□□ -1.72
HFM1-208ENST00000488023 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.33□□□□□ -1.729e-9■■■■■ 71.9
HFM1-208ENST00000488023 COA3Q9Y2R0 106 aaPredicted RBP4.33□□□□□ -1.72
HFM1-208ENST00000488023 RASA4BC9J798 803 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 H7BY64 318 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 SGSM2O43147 1006 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 RASA4O43374 803 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 KDM1AO60341 852 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 TUSC2O75896 110 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 CYP2C8P10632 490 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 ABCB4P21439 1286 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 PIK3CBP42338 1070 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 CASP2P42575 452 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 CHRNA2Q15822 529 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 CCDC93Q567U6 631 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 FAM47CQ5HY64 1035 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 ETV3LQ6ZN32 361 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 CEP68Q76N32 757 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 OTOP1Q7RTM1 612 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 GPR155Q7Z3F1 870 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 MIB1Q86YT6 1006 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 MYCT1Q8N699 235 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 CCDC89Q8N998 374 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 CHST13Q8NET6 341 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 DEPTORQ8TB45 409 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 DVL3Q92997 716 aaPredicted RBP4.32□□□□□ -1.72
HFM1-208ENST00000488023 ZBTB8AQ96BR9 441 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 KCNJ15Q99712 375 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 B3GNT5Q9BYG0 378 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 ZDHHC5Q9C0B5 715 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 CATSPERZQ9NTU4 200 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 GPRC5BQ9NZH0 403 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 TUBD1Q9UJT1 453 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 GPR52Q9Y2T5 361 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 SIT1Q9Y3P8 196 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 SPO11Q9Y5K1 396 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 KAT6BQ8WYB5 2073 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 FAM227AF5H4B4 570 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 H7C1D1 291 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 EPB41L2O43491 1005 aaKnown RBP4.32□□□□□ -1.72
HFM1-208ENST00000488023 TLR5O60602 858 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms