RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 ACTR2P61160 394 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 TROAPQ12815 778 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 DRP2Q13474 957 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 GRM2Q14416 872 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 UBE2SQ16763 222 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 TANGO2Q6ICL3 276 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 LILRA6Q6PI73 481 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 PPFIBP1Q86W92 1011 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 PROSER1Q86XN7 944 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 MIER1Q8N108 512 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 LRRC71Q8N4P6 559 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 LINC01465Q8N7H1 131 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 HNRNPLLQ8WVV9 542 aaKnown RBP6.7□□□□□ -1.34
COL4A3-206ENST00000487633 RABGGTAQ92696 567 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 STAMQ92783 540 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 RPS6KC1Q96S38 1066 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 HNRNPABQ99729 332 aaKnown RBP6.7□□□□□ -1.34
COL4A3-206ENST00000487633 PRKD2Q9BZL6 878 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 RIOX1Q9H6W3 641 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 KAT14Q9H8E8 782 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 PIDD1Q9HB75 910 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 MAP3K20Q9NYL2 800 aaKnown RBP6.7□□□□□ -1.34
COL4A3-206ENST00000487633 PTPRBP23467 1997 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 HECTD1Q9ULT8 2610 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 MYO16Q9Y6X6 1858 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 IGKV6D-21A0A0A0MT36 114 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 TMEM8BA6NDV4 472 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 DDX39AO00148 427 aaKnown RBP6.69□□□□□ -1.34
COL4A3-206ENST00000487633 NRP1O14786 923 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 CCL16O15467 120 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 ADAM12O43184 909 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 GAS2O43903 313 aaKnown RBP6.69□□□□□ -1.34
COL4A3-206ENST00000487633 ATG7O95352 703 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 GLUD1P00367 558 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 POMCP01189 267 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 FCARP24071 287 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 IGFBP6P24592 240 aaPredicted RBP6.69□□□□□ -1.34
COL4A3-206ENST00000487633 PHKA2P46019 1235 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 RAP1GAPP47736 663 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 FAM193AP78312 1265 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 GIT2Q14161 759 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 SLC5A9Q2M3M2 681 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 RNF43Q68DV7 783 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 AGMOQ6ZNB7 445 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 MFSD6Q6ZSS7 791 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 CYB5R4Q7L1T6 521 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 NPAS3Q8IXF0 933 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 DEFB124Q8NES8 71 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 GPRASP2Q96D09 838 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 PGBD1Q96JS3 809 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 ZSCAN10Q96SZ4 725 aaPredicted RBP6.69□□□□□ -1.34
COL4A3-206ENST00000487633 PHF20Q9BVI0 1012 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 EMILIN2Q9BXX0 1053 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 FAM126AQ9BYI3 521 aaPredicted RBP6.69□□□□□ -1.34
COL4A3-206ENST00000487633 RHOBTB2Q9BYZ6 727 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 RXFP1Q9HBX9 757 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 JPH1Q9HDC5 661 aaPredicted RBP6.69□□□□□ -1.34
COL4A3-206ENST00000487633 MIOSQ9NXC5 875 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.69□□□□□ -1.34
COL4A3-206ENST00000487633 ZSWIM5Q9P217 1185 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 SLC9A2Q9UBY0 812 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 CDH7Q9ULB5 785 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 PRG3Q9Y2Y8 225 aaPredicted RBP6.69□□□□□ -1.34
COL4A3-206ENST00000487633 THADAQ6YHU6 1953 aa6.69□□□□□ -1.34
COL4A3-206ENST00000487633 TNRC6BQ9UPQ9 1833 aaKnown RBP6.69□□□□□ -1.34
COL4A3-206ENST00000487633 APC2O95996 2303 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 PTPRDP23468 1912 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 PATE3B3GLJ2 98 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 CDX4O14627 284 aaPredicted RBP6.68□□□□□ -1.34
COL4A3-206ENST00000487633 DCLK1O15075 740 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 HOXA2O43364 376 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 ZMYND10O75800 440 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 STAM2O75886 525 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 EPN2O95208 641 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 SOD2P04179 222 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 PLA2G2AP14555 144 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 MAGEA9P43362 315 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 CXCL12P48061 93 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 SOX9P48436 509 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 MTMR1Q13613 665 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 SEC23AQ15436 765 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 NOMO2Q5JPE7 1267 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 TXNDC11Q6PKC3 985 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 PRSS55Q6UWB4 352 aaPredicted RBP6.68□□□□□ -1.34
COL4A3-206ENST00000487633 RSPO2Q6UXX9 243 aaPredicted RBP6.68□□□□□ -1.34
COL4A3-206ENST00000487633 ZNF852Q6ZMS4 543 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 PLPPR4Q7Z2D5 763 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 NLRX1Q86UT6 975 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 METTL13Q8N6R0 699 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 C12orf50Q8NA57 414 aaPredicted RBP6.68□□□□□ -1.34
COL4A3-206ENST00000487633 MCRS1Q96EZ8 462 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 KIF12Q96FN5 646 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 LRIG1Q96JA1 1093 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 HERC2P3Q9BVR0 1158 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 GPR62Q9BZJ7 368 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 MRPL17Q9NRX2 175 aaKnown RBP6.68□□□□□ -1.34
COL4A3-206ENST00000487633 DNMT3BQ9UBC3 853 aaKnown RBP6.68□□□□□ -1.34
COL4A3-206ENST00000487633 MYO18BQ8IUG5 2567 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 KALRNO60229 2985 aa6.68□□□□□ -1.34
COL4A3-206ENST00000487633 PI4KAP42356 2102 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms