RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 PPP4R3CPQ6ZMV5 832 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 CDR2LQ86X02 465 aaPredicted RBP21.56■■□□□ 1.04
SEC22A-208ENST00000487572 SFR1Q86XK3 245 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 NPAS4Q8IUM7 802 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 GRAMD1CQ8IYS0 662 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 YME1L1Q96TA2 773 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 NKX2-4Q9H2Z4 354 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 MAGEF1Q9HAY2 307 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 ARHGAP28Q9P2N2 729 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 KCNG1Q9UIX4 513 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 PHLPP2Q6ZVD8 1323 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 FAM237AA0A1B0GTK4 181 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 TTLL13PA6NNM8 815 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 K7ENM7 598 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 TRAK2O60296 914 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 EDN1P05305 212 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 SLFN14P0C7P3 912 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 AXLP30530 894 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 ASIC1P78348 528 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 FAM187BQ17R55 369 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 LONRF3Q496Y0 759 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 ECHDC2Q86YB7 292 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 TMEM161BQ8NDZ6 487 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 TIFAQ96CG3 184 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 PRIMPOLQ96LW4 560 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 RAD9AQ99638 391 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 BLZF1Q9H2G9 400 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 CNTNAP2Q9UHC6 1331 aa21.55■■□□□ 1.04
SEC22A-208ENST00000487572 LCHNA4D1U4 455 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 ACKR2O00590 384 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 CA3P07451 260 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 MAPTP10636 758 aaKnown RBP21.54■■□□□ 1.04
SEC22A-208ENST00000487572 CASP1P29466 404 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 GATMP50440 423 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 FXR1P51114 621 aaKnown RBP eCLIP21.54■■□□□ 1.04
SEC22A-208ENST00000487572 NCKAP1LP55160 1127 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 FAM189BP81408 668 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 TAS1R3Q7RTX0 852 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 HAUS6Q7Z4H7 955 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 FAM178BQ8IXR5 827 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 NTPCRQ9BSD7 190 aaKnown RBP21.54■■□□□ 1.04
SEC22A-208ENST00000487572 TRIM9Q9C026 710 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 TMEM134Q9H6X4 195 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 FAM105AQ9NUU6 356 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 PANK4Q9NVE7 773 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 TMEM161AQ9NX61 479 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 TBC1D7Q9P0N9 293 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 USP25Q9UHP3 1055 aa21.54■■□□□ 1.04
SEC22A-208ENST00000487572 A0A0U1RQF3 1178 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 FGFR1P11362 822 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 GAP43P17677 238 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 NMT1P30419 496 aaKnown RBP21.53■■□□□ 1.04
SEC22A-208ENST00000487572 RAB27AP51159 221 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 STRN3Q13033 797 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 HERC4Q5GLZ8 1057 aaPredicted RBP21.53■■□□□ 1.04
SEC22A-208ENST00000487572 UBXN11Q5T124 520 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 CCDC65Q8IXS2 484 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 CRIPAKQ8N1N5 446 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 CCDC51Q96ER9 411 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 PAGE5Q96GU1 130 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 C7orf25Q9BPX7 421 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 EIF2AQ9BY44 585 aaKnown RBP21.53■■□□□ 1.04
SEC22A-208ENST00000487572 RNF216Q9NWF9 866 aaPredicted RBP21.53■■□□□ 1.04
SEC22A-208ENST00000487572 INSL6Q9Y581 213 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 PCDHB2Q9Y5E7 798 aa21.53■■□□□ 1.04
SEC22A-208ENST00000487572 MYH11P35749 1972 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 GBF1Q92538 1859 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 A0A1B0GUA9 196 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 H0YCG3 227 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 GADD45BO75293 160 aaPredicted RBP21.52■■□□□ 1.04
SEC22A-208ENST00000487572 ZNF202O95125 648 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 NPTXRO95502 500 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 HTRA4P83105 476 aaPredicted RBP21.52■■□□□ 1.04
SEC22A-208ENST00000487572 CUL4BQ13620 913 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 PAN2Q504Q3 1202 aaKnown RBP21.52■■□□□ 1.04
SEC22A-208ENST00000487572 NT5DC1Q5TFE4 455 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 CNNM3Q8NE01 707 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 LPPQ93052 612 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 TRAIPQ9BWF2 469 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 TRIM6Q9C030 488 aaPredicted RBP21.52■■□□□ 1.04
SEC22A-208ENST00000487572 PDZD7Q9H5P4 517 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 ELAC1Q9H777 363 aaKnown RBP21.52■■□□□ 1.04
SEC22A-208ENST00000487572 MRPL44Q9H9J2 332 aaKnown RBP21.52■■□□□ 1.04
SEC22A-208ENST00000487572 SLC28A3Q9HAS3 691 aa21.52■■□□□ 1.04
SEC22A-208ENST00000487572 N4BP3O15049 544 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 DGKIO75912 1065 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 SKIP12755 728 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 ATF7P17544 494 aaPredicted RBP21.51■■□□□ 1.03
SEC22A-208ENST00000487572 COASYQ13057 564 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 ATF7IP2Q5U623 682 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 EEF1DP3Q658K8 133 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 PPP2R2DQ66LE6 453 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 SLC27A1Q6PCB7 646 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 KRBA2Q6ZNG9 492 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 TMEM87AQ8NBN3 555 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 FIZ1Q96SL8 496 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 TARS2Q9BW92 718 aaKnown RBP21.51■■□□□ 1.03
SEC22A-208ENST00000487572 APOL6Q9BWW8 343 aa21.51■■□□□ 1.03
SEC22A-208ENST00000487572 MRPL4Q9BYD3 311 aaKnown RBP21.51■■□□□ 1.03
SEC22A-208ENST00000487572 SEL1LQ9UBV2 794 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms