RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 TIPINQ9BVW5 301 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 OSBPL7Q9BZF2 842 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 ADAMTS10Q9H324 1103 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 SERTAD1Q9UHV2 236 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 INSL6Q9Y581 213 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 A0A087WZ62 844 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 MYMKA6NI61 221 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 SFI1A8K8P3 1242 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 EFCAB14O75071 495 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 ZNF202O95125 648 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 GLRA2P23416 452 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 AMPD3Q01432 767 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
TOP3B-216ENST00000487485 GIT2Q14161 759 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 PUS10Q3MIT2 529 aaKnown RBP11.81□□□□□ -0.52
TOP3B-216ENST00000487485 EPC2Q52LR7 807 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 TCEAL5Q5H9L2 206 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 FBXO47Q5MNV8 452 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 EP400NLQ6ZTU2 488 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 DYMQ7RTS9 669 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 ZNF410Q86VK4 478 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 DAW1Q8N136 415 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 DBF4BQ8NFT6 615 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 DDX12PQ92771 950 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 KIFAP3Q92845 792 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 DRC1Q96MC2 740 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 NLRP4Q96MN2 994 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 SCLT1Q96NL6 688 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 REEP2Q9BRK0 252 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 FDXACB1Q9BRP7 624 aaPredicted RBP11.81□□□□□ -0.52
TOP3B-216ENST00000487485 LRRC27Q9C0I9 530 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 TNMDQ9H2S6 317 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 MAGEF1Q9HAY2 307 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 KBTBD4Q9NVX7 518 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 USP25Q9UHP3 1055 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 SQORQ9Y6N5 450 aa11.81□□□□□ -0.52
TOP3B-216ENST00000487485 RIF1Q5UIP0 2472 aaKnown RBP11.8□□□□□ -0.52
TOP3B-216ENST00000487485 ACTN4O43707 911 aaKnown RBP11.8□□□□□ -0.52
TOP3B-216ENST00000487485 SLFN14P0C7P3 912 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 GHRP10912 638 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 EIF4BP23588 611 aaKnown RBP11.8□□□□□ -0.52
TOP3B-216ENST00000487485 AFMP43652 599 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 UBE2HP62256 183 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 HTRA4P83105 476 aaPredicted RBP11.8□□□□□ -0.52
TOP3B-216ENST00000487485 ZP2Q05996 745 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 MAPK7Q13164 816 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 SNW1Q13573 536 aaKnown RBP11.8□□□□□ -0.52
TOP3B-216ENST00000487485 CAPSQ13938 189 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 TFDP1Q14186 410 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 LPIN1Q14693 890 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 PTPROQ16827 1216 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 MYOCDQ8IZQ8 938 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 FMR1NBQ8N0W7 255 aaPredicted RBP11.8□□□□□ -0.52
TOP3B-216ENST00000487485 RNF149Q8NC42 400 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 ENGASEQ8NFI3 743 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 SP7Q8TDD2 431 aaPredicted RBP11.8□□□□□ -0.52
TOP3B-216ENST00000487485 TMEM40Q8WWA1 233 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 BSNDQ8WZ55 320 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 IFT74Q96LB3 600 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 GCOM2Q9BZD3 368 aaPredicted RBP11.8□□□□□ -0.52
TOP3B-216ENST00000487485 IFT122Q9HBG6 1241 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 ODF2LQ9ULJ1 636 aa11.8□□□□□ -0.52
TOP3B-216ENST00000487485 NOC2LQ9Y3T9 749 aaKnown RBP11.8□□□□□ -0.52
TOP3B-216ENST00000487485 ZFHX2Q9C0A1 2572 aaPredicted RBP11.8□□□□□ -0.52
TOP3B-216ENST00000487485 SPTBN4Q9H254 2564 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
TOP3B-216ENST00000487485 LRRIQ4A6NIV6 560 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 GOLGA6L22H0YM25 854 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 CSDE1O75534 798 aaKnown RBP11.79□□□□□ -0.52
TOP3B-216ENST00000487485 RPS6KA5O75582 802 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 AMHP03971 560 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 DARSP14868 501 aaKnown RBP11.79□□□□□ -0.52
TOP3B-216ENST00000487485 LIG1P18858 919 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 NAMPTP43490 491 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 PEX3P56589 373 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 PTENP60484 403 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 FAM160A1Q05DH4 1040 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 POU5F1BQ06416 359 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 GPM6BQ13491 265 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 PPP2R5AQ15172 486 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 PLEKHG4Q58EX7 1191 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 KRBA2Q6ZNG9 492 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 TSHZ1Q6ZSZ6 1077 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 HFE2Q6ZVN8 426 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 MYCT1Q8N699 235 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 CNNM3Q8NE01 707 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 DNAJC19Q96DA6 116 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 PABPC5Q96DU9 382 aaKnown RBP11.79□□□□□ -0.52
TOP3B-216ENST00000487485 PAGE5Q96GU1 130 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 C7orf25Q9BPX7 421 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 INO80BQ9C086 356 aaPredicted RBP11.79□□□□□ -0.52
TOP3B-216ENST00000487485 ZHX3Q9H4I2 956 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 AGO3Q9H9G7 860 aaKnown RBP11.79□□□□□ -0.52
TOP3B-216ENST00000487485 C17orf75Q9HAS0 396 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 LMBRD1Q9NUN5 540 aa11.79□□□□□ -0.52
TOP3B-216ENST00000487485 CCDC169A6NNP5 214 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 H3BNC9 293 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 GPR182O15218 404 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 TBCAO75347 108 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms