RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 LINC00271P0C7V0 271 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 STAG3L1P0CL83 205 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 ZSCAN20P17040 1043 aaPredicted RBP12.87□□□□□ -0.35
CLIP2-207ENST00000487447 RAB27AP51159 221 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 PEX3P56589 373 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 ECHDC2Q86YB7 292 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 IQUBQ8NA54 791 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 RSPH1Q8WYR4 309 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 FIZ1Q96SL8 496 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 FAM105AQ9NUU6 356 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 RNF19AQ9NV58 838 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 FAM13BQ9NYF5 915 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 LARSQ9P2J5 1176 aaKnown RBP12.87□□□□□ -0.35
CLIP2-207ENST00000487447 MSRAQ9UJ68 235 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 PIN4Q9Y237 131 aaKnown RBP12.87□□□□□ -0.35
CLIP2-207ENST00000487447 RBM19Q9Y4C8 960 aaKnown RBP12.87□□□□□ -0.35
CLIP2-207ENST00000487447 CHD7Q9P2D1 2997 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 ZMYM2Q9UBW7 1377 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 NPHP3-ACAD11A0A0J9YXS1 232 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 A0A1B0GUA9 196 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 LCHNA4D1U4 455 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 ACKR2O00590 384 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 ERLIN2O94905 339 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 ARHGEF15O94989 841 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 EOMESO95936 686 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 CA3P07451 260 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 SKIP12755 728 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 MYOGP15173 224 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 ARF4P18085 180 aaPredicted RBP12.86□□□□□ -0.35
CLIP2-207ENST00000487447 NCLP19338 710 aaKnown RBP12.86□□□□□ -0.35
CLIP2-207ENST00000487447 TAP1Q03518 808 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 DMP1Q13316 513 aaPredicted RBP12.86□□□□□ -0.35
CLIP2-207ENST00000487447 MAPK6Q16659 721 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 NOTUMQ6P988 496 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 TAS1R3Q7RTX0 852 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 MRPL10Q7Z7H8 261 aaKnown RBP12.86□□□□□ -0.35
CLIP2-207ENST00000487447 CMTR2Q8IYT2 770 aaKnown RBP12.86□□□□□ -0.35
CLIP2-207ENST00000487447 PDILTQ8N807 584 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 TMEM161BQ8NDZ6 487 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 DEPTORQ8TB45 409 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 PPM1EQ8WY54 764 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 DDX12PQ92771 950 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 KIFC3Q9BVG8 833 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 NKX2-4Q9H2Z4 354 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 ST6GALNAC4Q9H4F1 302 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 PARVGQ9HBI0 331 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 POLD4Q9HCU8 107 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 KMT5AQ9NQR1 393 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 KCNH3Q9ULD8 1083 aa12.86□□□□□ -0.35
CLIP2-207ENST00000487447 TRANK1O15050 2925 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 LINC01553A4QN01 128 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 POLR2DO15514 142 aaKnown RBP12.85□□□□□ -0.35
CLIP2-207ENST00000487447 B4GALT5O43286 388 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 PRKCBP05771 671 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 MAPTP10636 758 aaKnown RBP12.85□□□□□ -0.35
CLIP2-207ENST00000487447 PFKFB1P16118 471 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 CACNB1Q02641 598 aaPredicted RBP12.85□□□□□ -0.35
CLIP2-207ENST00000487447 RAD51AP2Q09MP3 1159 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 TWF2Q6IBS0 349 aaKnown RBP12.85□□□□□ -0.35
CLIP2-207ENST00000487447 CNNM3Q8NE01 707 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 PANK2Q9BZ23 570 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 LRRC27Q9C0I9 530 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 GDPD2Q9HCC8 539 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 PRDM6Q9NQX0 595 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 SEL1LQ9UBV2 794 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 USP25Q9UHP3 1055 aa12.85□□□□□ -0.35
CLIP2-207ENST00000487447 TTLL13PA6NNM8 815 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 SFI1A8K8P3 1242 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 H0YCG3 227 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 K7ERI5 159 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 INPPL1O15357 1258 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 HOXA2O43364 376 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
CLIP2-207ENST00000487447 UPP2O95045 317 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 PROZP22891 400 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 ABCD1P33897 745 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 ERVK-21P61565 698 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 NCBP1Q09161 790 aaKnown RBP12.84□□□□□ -0.35
CLIP2-207ENST00000487447 DHX8Q14562 1220 aaKnown RBP12.84□□□□□ -0.35
CLIP2-207ENST00000487447 FAM117BQ6P1L5 589 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 SLC27A1Q6PCB7 646 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 CLP1Q92989 425 aaKnown RBP12.84□□□□□ -0.35
CLIP2-207ENST00000487447 DHX58Q96C10 678 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 YME1L1Q96TA2 773 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 C7orf25Q9BPX7 421 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 STRA6Q9BX79 667 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 TRIM9Q9C026 710 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 PRDM12Q9H4Q4 367 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 PDZD7Q9H5P4 517 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 SLC28A3Q9HAS3 691 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 PTPRHQ9HD43 1115 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 OLFML3Q9NRN5 406 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 PCDHB7Q9Y5E2 793 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 PCDHB2Q9Y5E7 798 aa12.84□□□□□ -0.35
CLIP2-207ENST00000487447 A0A1B0GVL5 298 aa12.83□□□□□ -0.36
CLIP2-207ENST00000487447 CCDC169A6NNP5 214 aa12.83□□□□□ -0.36
CLIP2-207ENST00000487447 ABLIM1O14639 778 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms