RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 MSL3Q8N5Y2 521 aaKnown RBP5.75□□□□□ -1.49
LINC00888-204ENST00000487386 TSPEARQ8WU66 669 aa5.75□□□□□ -1.49
LINC00888-204ENST00000487386 CDK5RAP1Q96SZ6 601 aaKnown RBP5.75□□□□□ -1.49
LINC00888-204ENST00000487386 TRIM8Q9BZR9 551 aa5.75□□□□□ -1.49
LINC00888-204ENST00000487386 PUS7LQ9H0K6 701 aaKnown RBP5.75□□□□□ -1.49
LINC00888-204ENST00000487386 SLC5A4Q9NY91 659 aa5.75□□□□□ -1.49
LINC00888-204ENST00000487386 DPP7Q9UHL4 492 aa5.75□□□□□ -1.49
LINC00888-204ENST00000487386 TMEM127O75204 238 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 LTA4HP09960 611 aaKnown RBP5.74□□□□□ -1.49
LINC00888-204ENST00000487386 CDK11BP21127 795 aaKnown RBP5.74□□□□□ -1.49
LINC00888-204ENST00000487386 CDKN1CP49918 316 aaPredicted RBP5.74□□□□□ -1.49
LINC00888-204ENST00000487386 MEF2AQ02078 507 aaPredicted RBP5.74□□□□□ -1.49
LINC00888-204ENST00000487386 SPIDRQ14159 915 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 INAVAQ3KP66 663 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 C19orf54Q5BKX5 351 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 SPTY2D1Q68D10 685 aaPredicted RBP5.74□□□□□ -1.49
LINC00888-204ENST00000487386 KRT40Q6A162 431 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 ZNF808Q8N4W9 903 aaPredicted RBP5.74□□□□□ -1.49
LINC00888-204ENST00000487386 TGFBRAP1Q8WUH2 860 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 FAM89AQ96GI7 184 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 TMEM176AQ96HP8 235 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 ADOQ96SZ5 270 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 GPR20Q99678 358 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 TCF25Q9BQ70 676 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 MENTQ9BUN1 341 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 EDARQ9UNE0 448 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 SH3BP1Q9Y3L3 701 aa5.74□□□□□ -1.49
LINC00888-204ENST00000487386 MUSKO15146 869 aa5.73□□□□□ -1.49
LINC00888-204ENST00000487386 WNT3AP56704 352 aa5.73□□□□□ -1.49
LINC00888-204ENST00000487386 PRKD1Q15139 912 aaPredicted RBP5.73□□□□□ -1.49
LINC00888-204ENST00000487386 MUM1Q2TAK8 710 aa5.73□□□□□ -1.49
LINC00888-204ENST00000487386 ABHD15Q6UXT9 468 aa5.73□□□□□ -1.49
LINC00888-204ENST00000487386 CBARPQ8N350 705 aaPredicted RBP5.73□□□□□ -1.49
LINC00888-204ENST00000487386 D2HGDHQ8N465 521 aa5.73□□□□□ -1.49
LINC00888-204ENST00000487386 CNTD1Q8N815 330 aa5.73□□□□□ -1.49
LINC00888-204ENST00000487386 BORCS6Q96GS4 357 aa5.73□□□□□ -1.49
LINC00888-204ENST00000487386 QRSL1Q9H0R6 528 aaKnown RBP5.73□□□□□ -1.49
LINC00888-204ENST00000487386 MYRFQ9Y2G1 1151 aa5.73□□□□□ -1.49
LINC00888-204ENST00000487386 NRP1O14786 923 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 PLSCR1O15162 318 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 MTHFD2P13995 350 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 CTSSP25774 331 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 CANXP27824 592 aaKnown RBP5.72□□□□□ -1.49
LINC00888-204ENST00000487386 MTNR1BP49286 362 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 KLF1Q13351 362 aaPredicted RBP5.72□□□□□ -1.49
LINC00888-204ENST00000487386 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 LILRA3Q8N6C8 439 aaPredicted RBP5.72□□□□□ -1.49
LINC00888-204ENST00000487386 PRPF38AQ8NAV1 312 aaKnown RBP5.72□□□□□ -1.49
LINC00888-204ENST00000487386 SNX33Q8WV41 574 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 AUTS2Q8WXX7 1259 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 PAWRQ96IZ0 340 aaKnown RBP5.72□□□□□ -1.49
LINC00888-204ENST00000487386 PCDH12Q9NPG4 1184 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 CCM2LQ9NUG4 571 aaPredicted RBP5.72□□□□□ -1.49
LINC00888-204ENST00000487386 SCOCQ9UIL1 159 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 RCAN3Q9UKA8 241 aa5.72□□□□□ -1.49
LINC00888-204ENST00000487386 TRIM75PA6NK02 468 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 NPEPPSP55786 919 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 CDK17Q00537 523 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 SRSF2Q01130 221 aaKnown RBP5.71□□□□□ -1.5
LINC00888-204ENST00000487386 ADRM1Q16186 407 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 ZXDCQ2QGD7 858 aaPredicted RBP5.71□□□□□ -1.5
LINC00888-204ENST00000487386 ANO4Q32M45 955 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 TOR2AQ5JU69 321 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 SPDYAQ5MJ70 313 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 BTNL9Q6UXG8 535 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 GGNQ86UU5 652 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 PALM2Q8IXS6 379 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 ZNF512Q96ME7 567 aaPredicted RBP5.71□□□□□ -1.5
LINC00888-204ENST00000487386 BRINP2Q9C0B6 783 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 IFT122Q9HBG6 1241 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 TLR9Q9NR96 1032 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 NCDNQ9UBB6 729 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 COL4A3BPQ9Y5P4 624 aa5.71□□□□□ -1.5
LINC00888-204ENST00000487386 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 HOXA3O43365 443 aaPredicted RBP5.7□□□□□ -1.5
LINC00888-204ENST00000487386 STC2O76061 302 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 CFBP00751 764 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 INSRRP14616 1297 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 ACRV1P26436 265 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 CASRP41180 1078 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 GUCY2FP51841 1108 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 HHEXQ03014 270 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 MRPL49Q13405 166 aaKnown RBP5.7□□□□□ -1.5
LINC00888-204ENST00000487386 FKBP15Q5T1M5 1219 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 DBX2Q6ZNG2 339 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 SGMS1Q86VZ5 419 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 FAM177A1Q8N128 213 aaPredicted RBP5.7□□□□□ -1.5
LINC00888-204ENST00000487386 ANKRD35Q8N283 1001 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 GLB1L3Q8NCI6 653 aaPredicted RBP5.7□□□□□ -1.5
LINC00888-204ENST00000487386 FATE1Q969F0 183 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 MIEF2Q96C03 454 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 ZNF277Q9NRM2 450 aaPredicted RBP5.7□□□□□ -1.5
LINC00888-204ENST00000487386 WASHC2AQ641Q2 1341 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 RPTORQ8N122 1335 aa5.7□□□□□ -1.5
LINC00888-204ENST00000487386 CAPN14A8MX76 684 aa5.69□□□□□ -1.5
LINC00888-204ENST00000487386 GYPEP15421 78 aa5.69□□□□□ -1.5
LINC00888-204ENST00000487386 HIBADHP31937 336 aaKnown RBP5.69□□□□□ -1.5
LINC00888-204ENST00000487386 DUSP2Q05923 314 aa5.69□□□□□ -1.5
LINC00888-204ENST00000487386 MTMR1Q13613 665 aa5.69□□□□□ -1.5
LINC00888-204ENST00000487386 ELAVL1Q15717 326 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms