RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 MTG1Q9BT17 334 aaPredicted RBP8.78□□□□□ -1
ZNF541-204ENST00000487275 MRPL4Q9BYD3 311 aaKnown RBP8.78□□□□□ -1
ZNF541-204ENST00000487275 DDX20Q9UHI6 824 aaKnown RBP8.78□□□□□ -1
ZNF541-204ENST00000487275 TSKSQ9UJT2 592 aa8.78□□□□□ -1
ZNF541-204ENST00000487275 C17orf102A2RUQ5 167 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 KIAA0391O15091 583 aaKnown RBP8.77□□□□□ -1.01
ZNF541-204ENST00000487275 MAPK13O15264 365 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 MSCO60682 206 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 ADAMTS4O75173 837 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 PIGRP01833 764 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 AFPP02771 609 aaKnown RBP8.77□□□□□ -1.01
ZNF541-204ENST00000487275 INHAP05111 366 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 GJB1P08034 283 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 CYP2C9P11712 490 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 GRK4P32298 578 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 PTENP60484 403 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 NKX3-2P78367 333 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 POU5F1BQ06416 359 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 KCNH2Q12809 1159 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 SYCP1Q15431 976 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 TMEM132AQ24JP5 1023 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 MARCH8Q5T0T0 291 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 MAP3K21Q5TCX8 1036 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 SLFN12LQ6IEE8 588 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 CXCL17Q6UXB2 119 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 ZPBP2Q6X784 338 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 INTS8Q75QN2 995 aaKnown RBP8.77□□□□□ -1.01
ZNF541-204ENST00000487275 C7orf31Q8N865 590 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 RDH13Q8NBN7 331 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 PCSK9Q8NBP7 692 aaKnown RBP8.77□□□□□ -1.01
ZNF541-204ENST00000487275 NLRP7Q8WX94 980 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 ZNF668Q96K58 619 aaPredicted RBP8.77□□□□□ -1.01
ZNF541-204ENST00000487275 ZNF830Q96NB3 372 aaPredicted RBP8.77□□□□□ -1.01
ZNF541-204ENST00000487275 ERGIC2Q96RQ1 377 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 PPP1R16BQ96T49 567 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 NUP58Q9BVL2 599 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 PTCH2Q9Y6C5 1203 aa8.77□□□□□ -1.01
ZNF541-204ENST00000487275 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.77□□□□□ -1.01
ZNF541-204ENST00000487275 A0A087WZ62 844 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 SMIM35A0A1B0GVV1 85 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 MBLAC1A4D2B0 266 aaPredicted RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 GOLGA8IPA6NC78 632 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 GOLGA8JA6NMD2 632 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 AKR1B15C9JRZ8 316 aaPredicted RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 INO80B-WBP1J3KQ70 363 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 LDHAP00338 332 aaKnown RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 VTNP04004 478 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 CST5P28325 142 aaPredicted RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 ADSSP30520 456 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 GPC3P51654 580 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 CDC42EP1Q00587 391 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 RBL2Q08999 1139 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 BFSP1Q12934 665 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 TBX2Q13207 712 aaPredicted RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 ARID5BQ14865 1188 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 KCNA10Q16322 511 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 FAM47CQ5HY64 1035 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 SLC39A4Q6P5W5 647 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 RNF180Q86T96 592 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 ZNF410Q86VK4 478 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 LRRC8AQ8IWT6 810 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 KIAA0319LQ8IZA0 1049 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 GPD1LQ8N335 351 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 KLHDC9Q8NEP7 349 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 PPP1R13LQ8WUF5 828 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 CACTINQ8WUQ7 758 aaKnown RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 CPLX3Q8WVH0 158 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 IQCDQ96DY2 449 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 SAAL1Q96ER3 474 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 BORCS6Q96GS4 357 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 FDXACB1Q9BRP7 624 aaPredicted RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 TARS2Q9BW92 718 aaKnown RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 NFKBIZQ9BYH8 718 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 INO80BQ9C086 356 aaPredicted RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 CCDC113Q9H0I3 377 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 FAM49AQ9H0Q0 323 aaPredicted RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 MMRN2Q9H8L6 949 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 KIAA1586Q9HCI6 787 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 HMX1Q9NP08 348 aaPredicted RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 PRMT7Q9NVM4 692 aaPredicted RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 ANKFY1Q9P2R3 1169 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 HDAC6Q9UBN7 1215 aa8.76□□□□□ -1.01
ZNF541-204ENST00000487275 AGO2Q9UKV8 859 aaKnown RBP8.76□□□□□ -1.01
ZNF541-204ENST00000487275 ZNF233A6NK53 670 aa8.75□□□□□ -1.01
ZNF541-204ENST00000487275 ACKR2O00590 384 aa8.75□□□□□ -1.01
ZNF541-204ENST00000487275 TREHO43280 583 aa8.75□□□□□ -1.01
ZNF541-204ENST00000487275 EXTL3O43909 919 aa8.75□□□□□ -1.01
ZNF541-204ENST00000487275 N4BP1O75113 896 aaKnown RBP8.75□□□□□ -1.01
ZNF541-204ENST00000487275 MFAP3LO75121 409 aa8.75□□□□□ -1.01
ZNF541-204ENST00000487275 TOM1L1O75674 476 aa8.75□□□□□ -1.01
ZNF541-204ENST00000487275 ASGR1P07306 291 aa8.75□□□□□ -1.01
ZNF541-204ENST00000487275 HARSP12081 509 aaKnown RBP8.75□□□□□ -1.01
ZNF541-204ENST00000487275 TRIM21P19474 475 aaKnown RBP8.75□□□□□ -1.01
ZNF541-204ENST00000487275 MSNP26038 577 aaKnown RBP8.75□□□□□ -1.01
ZNF541-204ENST00000487275 CASP14P31944 242 aa8.75□□□□□ -1.01
ZNF541-204ENST00000487275 KLK7P49862 253 aa8.75□□□□□ -1.01
ZNF541-204ENST00000487275 VAMP7P51809 220 aa8.75□□□□□ -1.01
ZNF541-204ENST00000487275 ADKP55263 362 aaKnown RBP8.75□□□□□ -1.01
ZNF541-204ENST00000487275 NLRP11P59045 1033 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms