RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 PIDD1Q9HB75 910 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 SLC9A2Q9UBY0 812 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 KALRNO60229 2985 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 CHURC1-FNTBB4DL54 471 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 CYTH3O43739 400 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 VTNP04004 478 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 SOD2P04179 222 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 FNTBP49356 437 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 ACTR2P61160 394 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 SATB1Q01826 763 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 MTMR1Q13613 665 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 NOMO2Q5JPE7 1267 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 LILRA6Q6PI73 481 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 FGF13Q92913 245 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 ARRDC1-AS1Q9H2J1 176 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 RNF41Q9H4P4 317 aaPredicted RBP13.32□□□□□ -0.28
TRIM56-204ENST00000487252 HEBP1Q9NRV9 189 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 SSX2IPQ9Y2D8 614 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 NEUROG3Q9Y4Z2 214 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 TTC41PQ6P2S7 1318 aa13.32□□□□□ -0.28
TRIM56-204ENST00000487252 NOTCH4Q99466 2003 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 PNMA6FA0A0J9YX94 578 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 K7ESF4 209 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 EPN2O95208 641 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 SPATA31D3P0C874 917 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 MYBP10242 640 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 PHKA2P46019 1235 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 RAP1GAPP47736 663 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 CXCL12P48061 93 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 AK2P54819 239 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 GAS6Q14393 721 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 ZNF484Q5JVG2 852 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 USP17L6PQ6QN14 398 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 SPATA31D4Q6ZUB0 917 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 PROSER1Q86XN7 944 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 ZNF280BQ86YH2 543 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 HOMER1Q86YM7 354 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 ZNF710Q8N1W2 664 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 HERC2P3Q9BVR0 1158 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 JADE2Q9NQC1 790 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 HELLSQ9NRZ9 838 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 DACT1Q9NYF0 836 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 PKD2L1Q9P0L9 805 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 MSRB2Q9Y3D2 182 aa13.31□□□□□ -0.28
TRIM56-204ENST00000487252 C2CD2LO14523 706 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 TGM5O43548 720 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 OFD1O75665 1012 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 URODP06132 367 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 CEACAM1P13688 526 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 HOXA6P31267 233 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 GLB1LQ6UWU2 654 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 TAS1R1Q7RTX1 841 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 LURAP1LQ8IV03 231 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 LINC01465Q8N7H1 131 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 DNASE1L2Q92874 299 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 KXD1Q9BQD3 176 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 NFASCO94856 1347 aa13.3□□□□□ -0.28
TRIM56-204ENST00000487252 WDR81Q562E7 1941 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 MEIS3P2A8K0S8 358 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 MAN2B1O00754 1011 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 AXIN1O15169 862 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 GAS2O43903 313 aaKnown RBP13.29□□□□□ -0.28
TRIM56-204ENST00000487252 ECI2O75521 394 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 ZMYND10O75800 440 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 DDHD2O94830 711 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 NLRP11P59045 1033 aaKnown RBP13.29□□□□□ -0.28
TRIM56-204ENST00000487252 RNF43Q68DV7 783 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 GRASPQ7Z6J2 395 aaPredicted RBP13.29□□□□□ -0.28
TRIM56-204ENST00000487252 SPEM1Q8N4L4 309 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 GLIS3Q8NEA6 775 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 LPPQ93052 612 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 TMEM175Q9BSA9 504 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 CHST12Q9NRB3 414 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 MARCH5Q9NX47 278 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 ZSWIM5Q9P217 1185 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 PCDHGA5Q9Y5G8 931 aa13.29□□□□□ -0.28
TRIM56-204ENST00000487252 ZNF623O75123 536 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 ALDH2P05091 517 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 CHRNB1P11230 501 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 DARSP14868 501 aaKnown RBP13.28□□□□□ -0.28
TRIM56-204ENST00000487252 ATP4AP20648 1035 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 CSRP1P21291 193 aaKnown RBP13.28□□□□□ -0.28
TRIM56-204ENST00000487252 DSG1Q02413 1049 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 RNASELQ05823 741 aaKnown RBP13.28□□□□□ -0.28
TRIM56-204ENST00000487252 SH3PXD2AQ5TCZ1 1133 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 GPR65Q8IYL9 337 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 SMARCC2Q8TAQ2 1214 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 MBOAT7Q96N66 472 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 LMAN1LQ9HAT1 526 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 KCNH7Q9NS40 1196 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 CHST7Q9NS84 486 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 NDRG2Q9UN36 371 aaKnown RBP13.28□□□□□ -0.28
TRIM56-204ENST00000487252 TICRRQ7Z2Z1 1910 aa13.28□□□□□ -0.28
TRIM56-204ENST00000487252 FAM221BA6H8Z2 402 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 NRP1O14786 923 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 GLUD2P49448 558 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 NTHL1P78549 312 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 C19orf48Q6RUI8 117 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 ABHD15Q6UXT9 468 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms