RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 TGM5O43548 720 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 ALDH2P05091 517 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 CEACAM1P13688 526 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 ITGB5P18084 799 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 NLRP11P59045 1033 aaKnown RBP13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 MTMR1Q13613 665 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 GAS6Q14393 721 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 PLA2G2CQ5R387 149 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 DAB2IPQ5VWQ8 1189 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 USP17L6PQ6QN14 398 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 ITFG1Q8TB96 612 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 HDAC7Q8WUI4 952 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 ESR2Q92731 530 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 IER2Q9BTL4 223 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 EDEM2Q9BV94 578 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 JPH1Q9HDC5 661 aaPredicted RBP13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 STK39Q9UEW8 545 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 SSX2IPQ9Y2D8 614 aa13.9□□□□□ -0.18
ATPAF1-205ENST00000487193 MEIS3P2A8K0S8 358 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 HBP1O60381 514 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 DDHD2O94830 711 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 SOD2P04179 222 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 ACTR2P61160 394 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 GLB1LQ6UWU2 654 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 TRMT1LQ7Z2T5 733 aaKnown RBP13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 KBTBD6Q86V97 674 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 TBC1D10CQ8IV04 446 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 PANK1Q8TE04 598 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 FAM3CQ92520 227 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 LOXL4Q96JB6 756 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 POLIQ9UNA4 740 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 NEDD4P46934 1319 aa13.89□□□□□ -0.19
ATPAF1-205ENST00000487193 K7ESF4 209 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 NRP1O14786 923 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 OFD1O75665 1012 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 PAPLNO95428 1278 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 EIF4BP23588 611 aaKnown RBP13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 MPLP40238 635 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 RAP1GAPP47736 663 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 TRAF1Q13077 416 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 CACNA2D4Q7Z3S7 1137 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 PIBF1Q8WXW3 757 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 FAM193BQ96PV7 902 aaPredicted RBP13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 HNRNPABQ99729 332 aaKnown RBP13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 RXFP1Q9HBX9 757 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 VPS45Q9NRW7 570 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 DACT1Q9NYF0 836 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 AKT3Q9Y243 479 aa13.88□□□□□ -0.19
ATPAF1-205ENST00000487193 CSDE1O75534 798 aaKnown RBP13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 ZMYND10O75800 440 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 PHKA2P46019 1235 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 GLUD2P49448 558 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 CLCN3P51790 818 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 CCDC178Q5BJE1 867 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 ZNF484Q5JVG2 852 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 SPEM1Q8N4L4 309 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 DEFB124Q8NES8 71 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 ING5Q8WYH8 240 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 CUL5Q93034 780 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 ZSCAN10Q96SZ4 725 aaPredicted RBP13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 HERC2P3Q9BVR0 1158 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 C2orf42Q9NWW7 574 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 MAD2L2Q9UI95 211 aa13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 BAZ2BQ9UIF8 2168 aaKnown RBP13.87□□□□□ -0.19
ATPAF1-205ENST00000487193 ZBTB42B2RXF5 422 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 BACH1O14867 736 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 CCL16O15467 120 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 C22orf31O95567 290 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 CAPNS1P04632 268 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 CHRNB1P11230 501 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 GRM2Q14416 872 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 WDR5BQ86VZ2 330 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 MCRS1Q96EZ8 462 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 B3GALT6Q96L58 329 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 SCLT1Q96NL6 688 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 RBM12Q9NTZ6 932 aaKnown RBP13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 PRG3Q9Y2Y8 225 aaPredicted RBP13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 UBIAD1Q9Y5Z9 338 aa13.86□□□□□ -0.19
ATPAF1-205ENST00000487193 COL1A2P08123 1366 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 PNMA6FA0A0J9YX94 578 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 ECI2O75521 394 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 RPP40O75818 363 aaKnown RBP13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 PLA2G2AP14555 144 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 RPL17P18621 184 aaKnown RBP13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 CSRP1P21291 193 aaKnown RBP13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 PXNP49023 591 aaPredicted RBP13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 FGD1P98174 961 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 TANGO2Q6ICL3 276 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 LILRA6Q6PI73 481 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 URGCPQ8TCY9 931 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 SDF4Q9BRK5 362 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 RNF41Q9H4P4 317 aaPredicted RBP13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 BRD9Q9H8M2 597 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 JADE2Q9NQC1 790 aa13.85□□□□□ -0.19
ATPAF1-205ENST00000487193 TENM4Q6N022 2769 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 FREM2Q5SZK8 3169 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms