RNA–Protein interactions for RNA: ENST00000487121.1

MCFD2-216, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 3

Gene MCFD2, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-216ENST00000487121 SHC4Q6S5L8 630 aa16.63■□□□□ 0.25
MCFD2-216ENST00000487121 SV2BQ7L1I2 683 aa16.63■□□□□ 0.25
MCFD2-216ENST00000487121 ECHDC2Q86YB7 292 aa16.63■□□□□ 0.25
MCFD2-216ENST00000487121 CMTR2Q8IYT2 770 aaKnown RBP16.63■□□□□ 0.25
MCFD2-216ENST00000487121 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
MCFD2-216ENST00000487121 IPO9Q96P70 1041 aaKnown RBP16.63■□□□□ 0.25
MCFD2-216ENST00000487121 PLIN2Q99541 437 aa16.63■□□□□ 0.25
MCFD2-216ENST00000487121 TRAIPQ9BWF2 469 aa16.63■□□□□ 0.25
MCFD2-216ENST00000487121 TMEM161AQ9NX61 479 aa16.63■□□□□ 0.25
MCFD2-216ENST00000487121 LARSQ9P2J5 1176 aaKnown RBP16.63■□□□□ 0.25
MCFD2-216ENST00000487121 HCSTQ9UBK5 93 aa16.63■□□□□ 0.25
MCFD2-216ENST00000487121 USP25Q9UHP3 1055 aa16.63■□□□□ 0.25
MCFD2-216ENST00000487121 PIN4Q9Y237 131 aaKnown RBP16.63■□□□□ 0.25
MCFD2-216ENST00000487121 HIP1RO75146 1068 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 SKIP12755 728 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 AMPD3Q01432 767 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 GPBP1Q86WP2 473 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.62■□□□□ 0.25
MCFD2-216ENST00000487121 DEPTORQ8TB45 409 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 RSPH1Q8WYR4 309 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 CLP1Q92989 425 aaKnown RBP16.62■□□□□ 0.25
MCFD2-216ENST00000487121 CCDC51Q96ER9 411 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 SAMD11Q96NU1 681 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 RUSC1Q9BVN2 902 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 TNMDQ9H2S6 317 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 ELAC1Q9H777 363 aaKnown RBP16.62■□□□□ 0.25
MCFD2-216ENST00000487121 RNF19AQ9NV58 838 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 PRMT7Q9NVM4 692 aaPredicted RBP16.62■□□□□ 0.25
MCFD2-216ENST00000487121 CHD7Q9P2D1 2997 aa16.62■□□□□ 0.25
MCFD2-216ENST00000487121 A0A0U1RQF3 1178 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 LRRIQ4A6NIV6 560 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 H3BNC9 293 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 ERLIN2O94905 339 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 SMTNP53814 917 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 MCM6Q14566 821 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 SKIV2LQ15477 1246 aaKnown RBP16.61■□□□□ 0.25
MCFD2-216ENST00000487121 FAM187BQ17R55 369 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 NAALADL2Q58DX5 795 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 TWF2Q6IBS0 349 aaKnown RBP16.61■□□□□ 0.25
MCFD2-216ENST00000487121 SPIRE2Q8WWL2 714 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 KCNN1Q92952 543 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 CASD1Q96PB1 797 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 NTPCRQ9BSD7 190 aaKnown RBP16.61■□□□□ 0.25
MCFD2-216ENST00000487121 TSHZ2Q9NRE2 1034 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 AGPAT5Q9NUQ2 364 aa16.61■□□□□ 0.25
MCFD2-216ENST00000487121 FAM237AA0A1B0GTK4 181 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 INO80B-WBP1J3KQ70 363 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 GRM6O15303 877 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 CSPG5O95196 566 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 KRT18P05783 430 aaKnown RBP16.6■□□□□ 0.25
MCFD2-216ENST00000487121 PLS3P13797 630 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 ATF7P17544 494 aaPredicted RBP16.6■□□□□ 0.25
MCFD2-216ENST00000487121 HOXA11P31270 313 aaPredicted RBP16.6■□□□□ 0.25
MCFD2-216ENST00000487121 RAB27AP51159 221 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 ZNF131P52739 623 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 MAPK6Q16659 721 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 ARSHQ5FYA8 562 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 SPOUT1Q5T280 376 aaKnown RBP16.6■□□□□ 0.25
MCFD2-216ENST00000487121 ZNF598Q86UK7 904 aaKnown RBP16.6■□□□□ 0.25
MCFD2-216ENST00000487121 LPPQ93052 612 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 ALG13Q9NP73 1137 aaKnown RBP16.6■□□□□ 0.25
MCFD2-216ENST00000487121 TYW1Q9NV66 732 aaKnown RBP16.6■□□□□ 0.25
MCFD2-216ENST00000487121 SEL1LQ9UBV2 794 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 KCNH3Q9ULD8 1083 aa16.6■□□□□ 0.25
MCFD2-216ENST00000487121 COL4A6Q14031 1691 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 GOLGA6L4A6NEF3 574 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 C5orf67F2Z3F1 127 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 TBCAO75347 108 aaKnown RBP16.59■□□□□ 0.25
MCFD2-216ENST00000487121 RB1P06400 928 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 MBTD1Q05BQ5 628 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 MAPK7Q13164 816 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 E2F4Q16254 413 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 CLLU1OSQ5K130 101 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 NOTUMQ6P988 496 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 LRRC55Q6ZSA7 311 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 DAW1Q8N136 415 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 PDILTQ8N807 584 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 HELQQ8TDG4 1101 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 BSNDQ8WZ55 320 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 CCDC34Q96HJ3 373 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 CPB2Q96IY4 423 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 FZD8Q9H461 694 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 PARVGQ9HBI0 331 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 KMT5AQ9NQR1 393 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 KBTBD4Q9NVX7 518 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 LMCD1Q9NZU5 365 aa16.59■□□□□ 0.25
MCFD2-216ENST00000487121 A0A087X0B3 334 aa16.58■□□□□ 0.24
MCFD2-216ENST00000487121 MEIS3P2A8K0S8 358 aa16.58■□□□□ 0.24
MCFD2-216ENST00000487121 POLR2DO15514 142 aaKnown RBP16.58■□□□□ 0.24
MCFD2-216ENST00000487121 HOXA2O43364 376 aa16.58■□□□□ 0.24
MCFD2-216ENST00000487121 FAM13AO94988 1023 aa16.58■□□□□ 0.24
MCFD2-216ENST00000487121 EOMESO95936 686 aa16.58■□□□□ 0.24
MCFD2-216ENST00000487121 MYL1P05976 194 aa16.58■□□□□ 0.24
MCFD2-216ENST00000487121 NPTX2P47972 431 aa16.58■□□□□ 0.24
MCFD2-216ENST00000487121 PEX3P56589 373 aa16.58■□□□□ 0.24
MCFD2-216ENST00000487121 GIT2Q14161 759 aa16.58■□□□□ 0.24
MCFD2-216ENST00000487121 DHX8Q14562 1220 aaKnown RBP16.58■□□□□ 0.24
MCFD2-216ENST00000487121 UBXN11Q5T124 520 aa16.58■□□□□ 0.24
MCFD2-216ENST00000487121 CNNM4Q6P4Q7 775 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms