RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 TBC1D13Q9NVG8 400 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 CNTNAP2Q9UHC6 1331 aa21.22■□□□□ 0.99
CLIP2-206ENST00000487091 A0A087WWV3 80 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 PI4K2BG5E9Z4 385 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 NCLP19338 710 aaKnown RBP21.21■□□□□ 0.99
CLIP2-206ENST00000487091 MUTP22033 750 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 GLRA2P23416 452 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 TMEM184AQ6ZMB5 413 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 TMC7Q7Z402 723 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 C4orf32Q8N8J7 132 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 SMRP1Q8NCR6 262 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 MCPH1Q8NEM0 835 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 TMEM169Q96HH4 297 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 NRDE2Q9H7Z3 1164 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 UPF2Q9HAU5 1272 aaKnown RBP21.21■□□□□ 0.99
CLIP2-206ENST00000487091 KANSL3Q9P2N6 904 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 INPP5FQ9Y2H2 1132 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 KIF3AQ9Y496 699 aa21.21■□□□□ 0.99
CLIP2-206ENST00000487091 INO80B-WBP1J3KQ70 363 aa21.2■□□□□ 0.98
CLIP2-206ENST00000487091 TSPAN1O60635 241 aa21.2■□□□□ 0.98
CLIP2-206ENST00000487091 USO1O60763 962 aaKnown RBP21.2■□□□□ 0.98
CLIP2-206ENST00000487091 ZC3H11AO75152 810 aaKnown RBP eCLIP21.2■□□□□ 0.98
CLIP2-206ENST00000487091 GALTP07902 379 aa21.2■□□□□ 0.98
CLIP2-206ENST00000487091 FXR2P51116 673 aaKnown RBP eCLIP21.2■□□□□ 0.98
CLIP2-206ENST00000487091 RNASELQ05823 741 aaKnown RBP21.2■□□□□ 0.98
CLIP2-206ENST00000487091 KCNC3Q14003 757 aa21.2■□□□□ 0.98
CLIP2-206ENST00000487091 BMS1Q14692 1282 aaKnown RBP21.2■□□□□ 0.98
CLIP2-206ENST00000487091 NOTUMQ6P988 496 aa21.2■□□□□ 0.98
CLIP2-206ENST00000487091 MRPL43Q8N983 215 aaKnown RBP21.2■□□□□ 0.98
CLIP2-206ENST00000487091 URGCPQ8TCY9 931 aa21.2■□□□□ 0.98
CLIP2-206ENST00000487091 POP1Q99575 1024 aaKnown RBP21.2■□□□□ 0.98
CLIP2-206ENST00000487091 RSAD1Q9HA92 442 aa21.2■□□□□ 0.98
CLIP2-206ENST00000487091 UBN1Q9NPG3 1134 aa21.2■□□□□ 0.98
CLIP2-206ENST00000487091 BARX2Q9UMQ3 279 aaPredicted RBP21.2■□□□□ 0.98
CLIP2-206ENST00000487091 HIDE1A8MVS5 230 aa21.19■□□□□ 0.98
CLIP2-206ENST00000487091 NT5C1B-RDH14C9J2C7 533 aa21.19■□□□□ 0.98
CLIP2-206ENST00000487091 SRGAP2BP0DMP2 458 aa21.19■□□□□ 0.98
CLIP2-206ENST00000487091 MBTD1Q05BQ5 628 aa21.19■□□□□ 0.98
CLIP2-206ENST00000487091 SMC1AQ14683 1233 aaKnown RBP21.19■□□□□ 0.98
CLIP2-206ENST00000487091 AMHR2Q16671 573 aa21.19■□□□□ 0.98
CLIP2-206ENST00000487091 HAUS3Q68CZ6 603 aa21.19■□□□□ 0.98
CLIP2-206ENST00000487091 CSRNP2Q9H175 543 aa21.19■□□□□ 0.98
CLIP2-206ENST00000487091 POLR3FQ9H1D9 316 aaPredicted RBP21.19■□□□□ 0.98
CLIP2-206ENST00000487091 TOB1P50616 345 aaPredicted RBP21.18■□□□□ 0.98
CLIP2-206ENST00000487091 PDIA5Q14554 519 aa21.18■□□□□ 0.98
CLIP2-206ENST00000487091 POTEGQ6S5H5 508 aa21.18■□□□□ 0.98
CLIP2-206ENST00000487091 SMG8Q8ND04 991 aaKnown RBP21.18■□□□□ 0.98
CLIP2-206ENST00000487091 VN1R2Q8NFZ6 395 aa21.18■□□□□ 0.98
CLIP2-206ENST00000487091 IGSF21Q96ID5 467 aa21.18■□□□□ 0.98
CLIP2-206ENST00000487091 TMX3Q96JJ7 454 aa21.18■□□□□ 0.98
CLIP2-206ENST00000487091 STK24Q9Y6E0 443 aa21.18■□□□□ 0.98
CLIP2-206ENST00000487091 C5orf42Q9H799 3197 aa21.18■□□□□ 0.98
CLIP2-206ENST00000487091 C2orf71A6NGG8 1288 aa21.17■□□□□ 0.98
CLIP2-206ENST00000487091 ITGA4P13612 1032 aa21.17■□□□□ 0.98
CLIP2-206ENST00000487091 ALADP13716 330 aa21.17■□□□□ 0.98
CLIP2-206ENST00000487091 COL9A1P20849 921 aa21.17■□□□□ 0.98
CLIP2-206ENST00000487091 MCM2P49736 904 aa21.17■□□□□ 0.98
CLIP2-206ENST00000487091 DDX53Q86TM3 631 aaKnown RBP21.17■□□□□ 0.98
CLIP2-206ENST00000487091 CPB2Q96IY4 423 aa21.17■□□□□ 0.98
CLIP2-206ENST00000487091 TMEM175Q9BSA9 504 aa21.17■□□□□ 0.98
CLIP2-206ENST00000487091 STK39Q9UEW8 545 aa21.17■□□□□ 0.98
CLIP2-206ENST00000487091 IPPQ9Y573 584 aa21.17■□□□□ 0.98
CLIP2-206ENST00000487091 ARHGEF35A5YM69 484 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 LAD1O00515 517 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 INPPL1O15357 1258 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 GPR37L1O60883 481 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 CXCL14O95715 111 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 ARF4P18085 180 aaPredicted RBP21.16■□□□□ 0.98
CLIP2-206ENST00000487091 CYP11B2P19099 503 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 SLC11A1P49279 550 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 AFF1P51825 1210 aaKnown RBP21.16■□□□□ 0.98
CLIP2-206ENST00000487091 RBM10P98175 930 aaKnown RBP21.16■□□□□ 0.98
CLIP2-206ENST00000487091 PTGDRQ13258 359 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 NBR1Q14596 966 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 TMEM31Q5JXX7 168 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 PADI6Q6TGC4 694 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 MAEAQ7L5Y9 396 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 TMEM173Q86WV6 379 aaPredicted RBP21.16■□□□□ 0.98
CLIP2-206ENST00000487091 ZNF280BQ86YH2 543 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 VPS52Q8N1B4 723 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 FAM193BQ96PV7 902 aaPredicted RBP21.16■□□□□ 0.98
CLIP2-206ENST00000487091 EIF2AQ9BY44 585 aaKnown RBP21.16■□□□□ 0.98
CLIP2-206ENST00000487091 RAB34Q9BZG1 259 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 GBP3Q9H0R5 595 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 ZBP1Q9H171 429 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 GPRC5CQ9NQ84 441 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 DNAJB4Q9UDY4 337 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 LRWD1Q9UFC0 647 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 USP15Q9Y4E8 981 aaPredicted RBP21.16■□□□□ 0.98
CLIP2-206ENST00000487091 PCDHB6Q9Y5E3 794 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 IRAK3Q9Y616 596 aa21.16■□□□□ 0.98
CLIP2-206ENST00000487091 A0A1B0GUA9 196 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 LRRIQ4A6NIV6 560 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 DDHD2O94830 711 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 ALDH2P05091 517 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 CTSAP10619 480 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 HOXB8P17481 243 aaPredicted RBP21.15■□□□□ 0.98
CLIP2-206ENST00000487091 CCT6AP40227 531 aaKnown RBP21.15■□□□□ 0.98
CLIP2-206ENST00000487091 GIT2Q14161 759 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 CDCA2Q69YH5 1023 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms