RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 ASAP3Q8TDY4 903 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 PSPC1Q8WXF1 523 aaKnown RBP12.67□□□□□ -0.38
PRKCB-207ENST00000486868 SOCS4Q8WXH5 440 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 FAM81BQ96LP2 452 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 DESI2Q9BSY9 194 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 STK33Q9BYT3 514 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 SIX2Q9NPC8 291 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 LUC7LQ9NQ29 371 aaKnown RBP12.67□□□□□ -0.38
PRKCB-207ENST00000486868 PDGFCQ9NRA1 345 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 ARHGAP20Q9P2F6 1191 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 Q9Y3F1 56 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 ANKRD63C9JTQ0 380 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 K7ERI5 159 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 HNRNPDLO14979 420 aaKnown RBP12.66□□□□□ -0.38
PRKCB-207ENST00000486868 KRT86O43790 486 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 IGHA2P01877 340 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 LGALS2P05162 132 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 SLC9A1P19634 815 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 ARHGAP25P42331 645 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 VAV2P52735 878 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 CLDN10P78369 228 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 MYL7Q01449 175 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 POU5F1Q01860 360 aaKnown RBP12.66□□□□□ -0.38
PRKCB-207ENST00000486868 TFDP1Q14186 410 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 SNRNP35Q16560 246 aaKnown RBP12.66□□□□□ -0.38
PRKCB-207ENST00000486868 SLC39A4Q6P5W5 647 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 SYT10Q6XYQ8 523 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 REM2Q8IYK8 340 aaPredicted RBP12.66□□□□□ -0.38
PRKCB-207ENST00000486868 LMO3Q8TAP4 145 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 PARD3BQ8TEW8 1205 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 TMEM143Q96AN5 459 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 CRACR2AQ9BSW2 395 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 IKZF4Q9H2S9 585 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 GCNT4Q9P109 453 aa12.66□□□□□ -0.38
PRKCB-207ENST00000486868 ZNF215Q9UL58 517 aaPredicted RBP12.66□□□□□ -0.38
PRKCB-207ENST00000486868 REXO2Q9Y3B8 237 aaKnown RBP12.66□□□□□ -0.38
PRKCB-207ENST00000486868 ZNF233A6NK53 670 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 FAM155AB1AL88 458 aaPredicted RBP12.65□□□□□ -0.38
PRKCB-207ENST00000486868 PJA2O43164 708 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 SORBS3O60504 671 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 ALDH1A1P00352 501 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 FERP16591 822 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 EIF4A3P38919 411 aaKnown RBP12.65□□□□□ -0.38
PRKCB-207ENST00000486868 STAT1P42224 750 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 LIG4P49917 911 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 KIF11P52732 1056 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 SOX10P56693 466 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 GNG11P61952 73 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 CYP24A1Q07973 514 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 GRM1Q13255 1194 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 CAPSQ13938 189 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 ASIC2Q16515 512 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 EPC2Q52LR7 807 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 C1orf220Q5T0J3 134 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 KRT39Q6A163 491 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 TRMT1LQ7Z2T5 733 aaKnown RBP12.65□□□□□ -0.38
PRKCB-207ENST00000486868 ZBTB8OSQ8IWT0 167 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 LINC01465Q8N7H1 131 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 ACRBPQ8NEB7 543 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 NPLOC4Q8TAT6 608 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 POMGNT1Q8WZA1 660 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 COPS5Q92905 334 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 SPAG5Q96R06 1193 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 KIFC3Q9BVG8 833 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 INTS2Q9H0H0 1204 aaKnown RBP12.65□□□□□ -0.38
PRKCB-207ENST00000486868 CCDC113Q9H0I3 377 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 DEF6Q9H4E7 631 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 PCIF1Q9H4Z3 704 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 TMEM8AQ9HCN3 771 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 NLRC4Q9NPP4 1024 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 APEX2Q9UBZ4 518 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 TRPM7Q96QT4 1865 aa12.65□□□□□ -0.38
PRKCB-207ENST00000486868 LRRIQ4A6NIV6 560 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 CTIFO43310 598 aaKnown RBP12.64□□□□□ -0.39
PRKCB-207ENST00000486868 AKR1B10O60218 316 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 ZC3H11AO75152 810 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRKCB-207ENST00000486868 CASQ1P31415 396 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 RGS2P41220 211 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 MXI1P50539 228 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 GPC3P51654 580 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 AP3M2P53677 418 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 CDC42EP1Q00587 391 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 KLHL30Q0D2K2 578 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 LAMTOR4Q0VGL1 99 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 PSMD6Q15008 389 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 FAM187BQ17R55 369 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 CBWD6Q4V339 395 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 CBWD3Q5JTY5 395 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 CBWD5Q5RIA9 395 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 IRF2BP2Q7Z5L9 587 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 SMC1BQ8NDV3 1235 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 PRPF31Q8WWY3 499 aaKnown RBP12.64□□□□□ -0.39
PRKCB-207ENST00000486868 BICD1Q96G01 975 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 C16orf70Q9BSU1 422 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 MRPL4Q9BYD3 311 aaKnown RBP12.64□□□□□ -0.39
PRKCB-207ENST00000486868 CPA4Q9UI42 421 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 DNAI1Q9UI46 699 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
PRKCB-207ENST00000486868 FHOD1Q9Y613 1164 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms