RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 PRMT7Q9NVM4 692 aaPredicted RBP20.28■□□□□ 0.84
CLDN11-206ENST00000486429 SPG21Q9NZD8 308 aa20.28■□□□□ 0.84
CLDN11-206ENST00000486429 PUF60Q9UHX1 559 aaKnown RBP20.28■□□□□ 0.84
CLDN11-206ENST00000486429 LZTS1Q9Y250 596 aa20.28■□□□□ 0.84
CLDN11-206ENST00000486429 VWA3AA6NCI4 1184 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 H3BQ06 376 aaPredicted RBP20.27■□□□□ 0.84
CLDN11-206ENST00000486429 B4GALT5O43286 388 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 ZC3H11AO75152 810 aaKnown RBP eCLIP20.27■□□□□ 0.84
CLDN11-206ENST00000486429 ARF4P18085 180 aaPredicted RBP20.27■□□□□ 0.84
CLDN11-206ENST00000486429 NCLP19338 710 aaKnown RBP20.27■□□□□ 0.84
CLDN11-206ENST00000486429 CDC25AP30304 524 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 NAMPTP43490 491 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 RNASELQ05823 741 aaKnown RBP20.27■□□□□ 0.84
CLDN11-206ENST00000486429 PPP2R5AQ15172 486 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 ADGRD2Q7Z7M1 963 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 SLC39A11Q8N1S5 342 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 DEPTORQ8TB45 409 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 MICAL1Q8TDZ2 1067 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 BSNDQ8WZ55 320 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 CSRNP2Q9H175 543 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 C2orf40Q9H1Z8 148 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 TBC1D13Q9NVG8 400 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 DNM3Q9UQ16 869 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 PCDHGC5Q9Y5F6 944 aa20.27■□□□□ 0.84
CLDN11-206ENST00000486429 CARNS1A5YM72 827 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 K7ELQ4 463 aaPredicted RBP20.26■□□□□ 0.83
CLDN11-206ENST00000486429 OFD1O75665 1012 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 EYA4O95677 639 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 BMP15O95972 392 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 ALDH7A1P49419 539 aaKnown RBP20.26■□□□□ 0.83
CLDN11-206ENST00000486429 BCAR1P56945 870 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 KRT17Q04695 432 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 ZRSR1Q15695 479 aaKnown RBP20.26■□□□□ 0.83
CLDN11-206ENST00000486429 PDE12Q6L8Q7 609 aaKnown RBP20.26■□□□□ 0.83
CLDN11-206ENST00000486429 PPP4R3CPQ6ZMV5 832 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 AGMOQ6ZNB7 445 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 KIFAP3Q92845 792 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 INTS4Q96HW7 963 aaKnown RBP20.26■□□□□ 0.83
CLDN11-206ENST00000486429 PRIMPOLQ96LW4 560 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 MMTAG2Q9BU76 263 aaKnown RBP20.26■□□□□ 0.83
CLDN11-206ENST00000486429 EIF2AQ9BY44 585 aaKnown RBP20.26■□□□□ 0.83
CLDN11-206ENST00000486429 TRIM6Q9C030 488 aaPredicted RBP20.26■□□□□ 0.83
CLDN11-206ENST00000486429 IGFLR1Q9H665 355 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 ENTPD7Q9NQZ7 604 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 IPPQ9Y573 584 aa20.26■□□□□ 0.83
CLDN11-206ENST00000486429 TCF20Q9UGU0 1960 aaKnown RBP20.25■□□□□ 0.83
CLDN11-206ENST00000486429 E9PMD0 336 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 TNFRSF10AO00220 468 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 ITGA4P13612 1032 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 GTF2F1P35269 517 aaKnown RBP eCLIP20.25■□□□□ 0.83
CLDN11-206ENST00000486429 NRIP1P48552 1158 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 CTC1Q2NKJ3 1217 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 HACE1Q8IYU2 909 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 SMG8Q8ND04 991 aaKnown RBP20.25■□□□□ 0.83
CLDN11-206ENST00000486429 TMEM169Q96HH4 297 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 IFT74Q96LB3 600 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 NECAB3Q96P71 396 aaPredicted RBP20.25■□□□□ 0.83
CLDN11-206ENST00000486429 TCF25Q9BQ70 676 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 GBP3Q9H0R5 595 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 UBN1Q9NPG3 1134 aa20.25■□□□□ 0.83
CLDN11-206ENST00000486429 BDP1A6H8Y1 2624 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 FSCN2O14926 492 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 TBX10O75333 385 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 ERVFC1P60507 584 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 MAPK6Q16659 721 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 TMEM132AQ24JP5 1023 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 PUS10Q3MIT2 529 aaKnown RBP20.24■□□□□ 0.83
CLDN11-206ENST00000486429 PLPP4Q5VZY2 271 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 PTCRAQ6ISU1 281 aaPredicted RBP20.24■□□□□ 0.83
CLDN11-206ENST00000486429 SLC27A1Q6PCB7 646 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 EFHBQ8N7U6 833 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.24■□□□□ 0.83
CLDN11-206ENST00000486429 CDK5RAP3Q96JB5 506 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 NT5C3AQ9H0P0 336 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 NRDE2Q9H7Z3 1164 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 TLE6Q9H808 572 aa20.24■□□□□ 0.83
CLDN11-206ENST00000486429 NCOR1O75376 2440 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 FSD2A1L4K1 749 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 NT5C1B-RDH14C9J2C7 533 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 LINC01565O15544 149 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 NPTXRO95502 500 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 PRKCBP05771 671 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 LTBRP36941 435 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 NDUFV1P49821 464 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 FAM187BQ17R55 369 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 HYIQ5T013 277 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 KCNK18Q7Z418 384 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 RBM23Q86U06 439 aaKnown RBP20.23■□□□□ 0.83
CLDN11-206ENST00000486429 CDR2LQ86X02 465 aaPredicted RBP20.23■□□□□ 0.83
CLDN11-206ENST00000486429 AK8Q96MA6 479 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 KIFC3Q9BVG8 833 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 APOL6Q9BWW8 343 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 FZD8Q9H461 694 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 NXF3Q9H4D5 531 aaKnown RBP20.23■□□□□ 0.83
CLDN11-206ENST00000486429 KANSL3Q9P2N6 904 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 FAM50BQ9Y247 325 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 HES2Q9Y543 173 aa20.23■□□□□ 0.83
CLDN11-206ENST00000486429 A0A1B0GUA9 196 aa20.22■□□□□ 0.83
CLDN11-206ENST00000486429 LIG1P18858 919 aa20.22■□□□□ 0.83
CLDN11-206ENST00000486429 SYT1P21579 422 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms