RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 DNAJB1P25685 340 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 CA8P35219 290 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 ALDH7A1P49419 539 aaKnown RBP14.27□□□□□ -0.13
CHMP3-208ENST00000486404 NDUFV1P49821 464 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 KRT17Q04695 432 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 POU5F1BQ06416 359 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 PPP2R5AQ15172 486 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 LEXMQ3ZCV2 418 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 NOMO2Q5JPE7 1267 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 IFNLR1Q8IU57 520 aaPredicted RBP14.27□□□□□ -0.13
CHMP3-208ENST00000486404 CNNM3Q8NE01 707 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 DEPTORQ8TB45 409 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 TMEM169Q96HH4 297 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 CPB2Q96IY4 423 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 IFT74Q96LB3 600 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 FAM50BQ9Y247 325 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 GTF3C3Q9Y5Q9 886 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 VCANP13611 3396 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 XIRP2A4UGR9 3374 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 FSD2A1L4K1 749 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 TNFRSF10AO00220 468 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 ZNF623O75123 536 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 BMP15O95972 392 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 BMP1P13497 986 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 ITGA4P13612 1032 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 LIG1P18858 919 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 CYP11B2P19099 503 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 IRS1P35568 1242 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 NRIP1P48552 1158 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 HYAL1Q12794 435 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 CUL4AQ13619 759 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 PUS10Q3MIT2 529 aaKnown RBP14.26□□□□□ -0.13
CHMP3-208ENST00000486404 PLPP4Q5VZY2 271 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 CDCA2Q69YH5 1023 aaPredicted RBP14.26□□□□□ -0.13
CHMP3-208ENST00000486404 PTCRAQ6ISU1 281 aaPredicted RBP14.26□□□□□ -0.13
CHMP3-208ENST00000486404 PDE12Q6L8Q7 609 aaKnown RBP14.26□□□□□ -0.13
CHMP3-208ENST00000486404 LRRC55Q6ZSA7 311 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 ADGRD2Q7Z7M1 963 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 RASSF8Q8NHQ8 419 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 MRPS27Q92552 414 aaKnown RBP14.26□□□□□ -0.13
CHMP3-208ENST00000486404 KIFAP3Q92845 792 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 FAM193BQ96PV7 902 aaPredicted RBP14.26□□□□□ -0.13
CHMP3-208ENST00000486404 TCF25Q9BQ70 676 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 APOL6Q9BWW8 343 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 CSRNP2Q9H175 543 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 TBC1D13Q9NVG8 400 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 PRMT7Q9NVM4 692 aaPredicted RBP14.26□□□□□ -0.13
CHMP3-208ENST00000486404 DNM3Q9UQ16 869 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 LZTS1Q9Y250 596 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 PCDHGC5Q9Y5F6 944 aa14.26□□□□□ -0.13
CHMP3-208ENST00000486404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-208ENST00000486404 MEIS3P2A8K0S8 358 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 B4GALT5O43286 388 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 SSBP05455 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHMP3-208ENST00000486404 SRGAP2BP0DMP2 458 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 ARF4P18085 180 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-208ENST00000486404 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
CHMP3-208ENST00000486404 HOXA11P31270 313 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-208ENST00000486404 NAMPTP43490 491 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 BCAR1P56945 870 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 PLCB3Q01970 1234 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 CAMK1Q14012 370 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 BMS1Q14692 1282 aaKnown RBP14.25□□□□□ -0.13
CHMP3-208ENST00000486404 UBXN11Q5T124 520 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 ARL6IP4Q66PJ3 421 aaKnown RBP14.25□□□□□ -0.13
CHMP3-208ENST00000486404 SLC27A1Q6PCB7 646 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 RBM23Q86U06 439 aaKnown RBP14.25□□□□□ -0.13
CHMP3-208ENST00000486404 SLC39A11Q8N1S5 342 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 PRIMPOLQ96LW4 560 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 NECAB3Q96P71 396 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-208ENST00000486404 EIF2AQ9BY44 585 aaKnown RBP14.25□□□□□ -0.13
CHMP3-208ENST00000486404 NT5C3AQ9H0P0 336 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 TLE6Q9H808 572 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 UBN1Q9NPG3 1134 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 IPPQ9Y573 584 aa14.25□□□□□ -0.13
CHMP3-208ENST00000486404 E9PMD0 336 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 K7ELQ4 463 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-208ENST00000486404 OFD1O75665 1012 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 NPTXRO95502 500 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 EYA4O95677 639 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 PRKCBP05771 671 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 CDC25AP30304 524 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 GTF2F1P35269 517 aaKnown RBP eCLIP14.24□□□□□ -0.13
CHMP3-208ENST00000486404 MLH1P40692 756 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 PRPF4BQ13523 1007 aaKnown RBP14.24□□□□□ -0.13
CHMP3-208ENST00000486404 COL19A1Q14993 1142 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 CLUL1Q15846 466 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 IL17AQ16552 155 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 ECM1Q16610 540 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 MAPK6Q16659 721 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 AGMOQ6ZNB7 445 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 TMC7Q7Z402 723 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 BSNDQ8WZ55 320 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 DRC1Q96MC2 740 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 NXF3Q9H4D5 531 aaKnown RBP14.24□□□□□ -0.13
CHMP3-208ENST00000486404 NGRNQ9NPE2 291 aaKnown RBP14.24□□□□□ -0.13
CHMP3-208ENST00000486404 KANSL3Q9P2N6 904 aa14.24□□□□□ -0.13
CHMP3-208ENST00000486404 NT5C1B-RDH14C9J2C7 533 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 N4BP3O15049 544 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 TBX10O75333 385 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms