RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 CYP26B1Q9NR63 512 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 CGNQ9P2M7 1197 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 KCNG1Q9UIX4 513 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 CAPN11Q9UMQ6 739 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 LUC7L2Q9Y383 392 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 GSTTP1A0A1W2PQM5 241 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 OATP04181 439 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 EPB41P11171 864 aaKnown RBP15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 TRIM21P19474 475 aaKnown RBP15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 SMTNP53814 917 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 NCKAP1LP55160 1127 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 KCNA1Q09470 495 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 MYBPC2Q14324 1141 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 TRMT1LQ7Z2T5 733 aaKnown RBP15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 AFAP1L1Q8TED9 768 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 HVCN1Q96D96 273 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 SH2D3AQ9BRG2 576 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 MKNK1Q9BUB5 465 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 UBE2OQ9C0C9 1292 aaKnown RBP15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 ATP6V0A4Q9HBG4 840 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 ABHD10Q9NUJ1 306 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 TELO2Q9Y4R8 837 aa15.98■□□□□ 0.15
POLR2J3-204ENST00000486319 A0A1W2PQJ5 194 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 KIAA0355O15063 1070 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 RAG1P15918 1043 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 FECHP22830 423 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 KRT9P35527 623 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 CHMP4BP1P59074 171 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 SNRPFP62306 86 aaKnown RBP15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 GTF2BQ00403 316 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 TSR1Q2NL82 804 aaKnown RBP15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 NBPF20Q3BBV1 942 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 HSDL1Q3SXM5 330 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 E4F1Q66K89 784 aaPredicted RBP15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 HAUS6Q7Z4H7 955 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 SYCP3Q8IZU3 236 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 BADQ92934 168 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 ACCSQ96QU6 501 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 NRBP2Q9NSY0 501 aa15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 ARMCX3Q9UH62 379 aaPredicted RBP15.97■□□□□ 0.15
POLR2J3-204ENST00000486319 TTC26A0AVF1 554 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 PPFIA4O75335 1185 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 CD4P01730 458 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 ITGB8P26012 769 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 ABCD1P33897 745 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 STAT5BP51692 787 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 PEX3P56589 373 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 DMP1Q13316 513 aaPredicted RBP15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 FAM47CQ5HY64 1035 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 TMTC1Q8IUR5 882 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 SLC9A9Q8IVB4 645 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 ZNF397Q8NF99 534 aaPredicted RBP15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 OR8K1Q8NGG5 319 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 TMEM174Q8WUU8 243 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 SPIRE2Q8WWL2 714 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 NTPCRQ9BSD7 190 aaKnown RBP15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 NIFKQ9BYG3 293 aaKnown RBP15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 TTYH3Q9C0H2 523 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 AZI2Q9H6S1 392 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 AGPAT3Q9NRZ7 376 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 SIK3Q9Y2K2 1263 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 PPME1Q9Y570 386 aa15.96■□□□□ 0.15
POLR2J3-204ENST00000486319 A0A1W2PPC1 479 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 H0YCG3 227 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 NOP56O00567 594 aaKnown RBP15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 CLIC2O15247 247 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 ZSCAN12O43309 604 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 B4GALT4O60513 344 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 ATP4AP20648 1035 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 PSMC2P35998 433 aaKnown RBP15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 TCF7P36402 384 aaPredicted RBP15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 MTERF2Q49AM1 385 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 NFRKBQ6P4R8 1299 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 FAM167AQ96KS9 214 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 DNAJC7Q99615 494 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 EDEM3Q9BZQ6 932 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 TRPV6Q9H1D0 765 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 GPRC5CQ9NQ84 441 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 TBX21Q9UL17 535 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 EXOC7Q9UPT5 735 aa15.95■□□□□ 0.14
POLR2J3-204ENST00000486319 AKAP3O75969 853 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 TIMP1P01033 207 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 SCP2P22307 547 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 RFC5P40937 340 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 POLGP54098 1239 aaPredicted RBP15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 ZBED6P86452 979 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 CYP26C1Q6V0L0 522 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 KSR1Q8IVT5 923 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 C12orf56Q8IXR9 622 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 PPP1R13LQ8WUF5 828 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 KAT2BQ92831 832 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 IFT74Q96LB3 600 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 GPR20Q99678 358 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 KATNAL1Q9BW62 490 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 KMT5AQ9NQR1 393 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 DMAC2Q9NW81 257 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 TRMT1Q9NXH9 659 aaKnown RBP15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 FRMD4BQ9Y2L6 1034 aa15.94■□□□□ 0.14
POLR2J3-204ENST00000486319 GOLGA6L9A6NEM1 432 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms