RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 FERMT3Q86UX7 667 aa23.27■■□□□ 1.32
LMBR1-217ENST00000485985 EXOC8Q8IYI6 725 aa23.27■■□□□ 1.32
LMBR1-217ENST00000485985 CASP10Q92851 521 aa23.27■■□□□ 1.32
LMBR1-217ENST00000485985 MTRQ99707 1265 aa23.27■■□□□ 1.32
LMBR1-217ENST00000485985 C2orf71A6NGG8 1288 aa23.26■■□□□ 1.31
LMBR1-217ENST00000485985 LYPLA2O95372 231 aa23.26■■□□□ 1.31
LMBR1-217ENST00000485985 SP100P23497 879 aaPredicted RBP23.26■■□□□ 1.31
LMBR1-217ENST00000485985 AVPR2P30518 371 aa23.26■■□□□ 1.31
LMBR1-217ENST00000485985 TXKP42681 527 aa23.26■■□□□ 1.31
LMBR1-217ENST00000485985 RAB27AP51159 221 aa23.26■■□□□ 1.31
LMBR1-217ENST00000485985 VCPP55072 806 aaKnown RBP23.26■■□□□ 1.31
LMBR1-217ENST00000485985 BCAR1P56945 870 aa23.26■■□□□ 1.31
LMBR1-217ENST00000485985 SRGAP1Q7Z6B7 1085 aa23.26■■□□□ 1.31
LMBR1-217ENST00000485985 TMEM173Q86WV6 379 aaPredicted RBP23.26■■□□□ 1.31
LMBR1-217ENST00000485985 RNF149Q8NC42 400 aa23.26■■□□□ 1.31
LMBR1-217ENST00000485985 CDH22Q9UJ99 828 aa23.26■■□□□ 1.31
LMBR1-217ENST00000485985 HCFC2Q9Y5Z7 792 aa23.26■■□□□ 1.31
LMBR1-217ENST00000485985 CACNA1HO95180 2353 aa23.25■■□□□ 1.31
LMBR1-217ENST00000485985 NT5C1B-RDH14C9J2C7 533 aa23.25■■□□□ 1.31
LMBR1-217ENST00000485985 HOXA11P31270 313 aaPredicted RBP23.25■■□□□ 1.31
LMBR1-217ENST00000485985 TPRNQ4KMQ1 711 aa23.25■■□□□ 1.31
LMBR1-217ENST00000485985 UBXN11Q5T124 520 aa23.25■■□□□ 1.31
LMBR1-217ENST00000485985 ZBTB33Q86T24 672 aa23.25■■□□□ 1.31
LMBR1-217ENST00000485985 TCP11Q8WWU5 503 aa23.25■■□□□ 1.31
LMBR1-217ENST00000485985 ADAM7Q9H2U9 754 aa23.25■■□□□ 1.31
LMBR1-217ENST00000485985 TBC1D13Q9NVG8 400 aa23.25■■□□□ 1.31
LMBR1-217ENST00000485985 INPP5FQ9Y2H2 1132 aa23.25■■□□□ 1.31
LMBR1-217ENST00000485985 NR2E1Q9Y466 385 aa23.25■■□□□ 1.31
LMBR1-217ENST00000485985 B4GALT3O60512 393 aa23.24■■□□□ 1.31
LMBR1-217ENST00000485985 CLASP2O75122 1294 aaKnown RBP23.24■■□□□ 1.31
LMBR1-217ENST00000485985 ZNF623O75123 536 aa23.24■■□□□ 1.31
LMBR1-217ENST00000485985 ZC3H11AO75152 810 aaKnown RBP eCLIP23.24■■□□□ 1.31
LMBR1-217ENST00000485985 SKIP12755 728 aa23.24■■□□□ 1.31
LMBR1-217ENST00000485985 MCM7P33993 719 aa23.24■■□□□ 1.31
LMBR1-217ENST00000485985 ALDH7A1P49419 539 aaKnown RBP23.24■■□□□ 1.31
LMBR1-217ENST00000485985 ITIH3Q06033 890 aa23.24■■□□□ 1.31
LMBR1-217ENST00000485985 CES5AQ6NT32 575 aa23.24■■□□□ 1.31
LMBR1-217ENST00000485985 GLB1LQ6UWU2 654 aa23.24■■□□□ 1.31
LMBR1-217ENST00000485985 C8orf76Q96K31 380 aa23.24■■□□□ 1.31
LMBR1-217ENST00000485985 LLPHQ9BRT6 129 aaKnown RBP23.24■■□□□ 1.31
LMBR1-217ENST00000485985 TSHZ2Q9NRE2 1034 aa23.24■■□□□ 1.31
LMBR1-217ENST00000485985 PCDHB2Q9Y5E7 798 aa23.24■■□□□ 1.31
LMBR1-217ENST00000485985 MYO10Q9HD67 2058 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 OFD1O75665 1012 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 ATP2B1P20020 1258 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 RARRES1P49788 294 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 NOMO2Q5JPE7 1267 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 AGMOQ6ZNB7 445 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 KREMEN2Q8NCW0 462 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 ASAP3Q8TDY4 903 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 BCL7CQ8WUZ0 217 aaPredicted RBP23.23■■□□□ 1.31
LMBR1-217ENST00000485985 NECTIN4Q96NY8 510 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 POMKQ9H5K3 350 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 NRDE2Q9H7Z3 1164 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 ANKEF1Q9NU02 776 aa23.23■■□□□ 1.31
LMBR1-217ENST00000485985 A0A087WWV3 80 aa23.22■■□□□ 1.31
LMBR1-217ENST00000485985 ASAP2O43150 1006 aa23.22■■□□□ 1.31
LMBR1-217ENST00000485985 CXCL14O95715 111 aa23.22■■□□□ 1.31
LMBR1-217ENST00000485985 SPATA31C1P0DKV0 1188 aa23.22■■□□□ 1.31
LMBR1-217ENST00000485985 AFF1P51825 1210 aaKnown RBP23.22■■□□□ 1.31
LMBR1-217ENST00000485985 CAPSQ13938 189 aa23.22■■□□□ 1.31
LMBR1-217ENST00000485985 BMS1Q14692 1282 aaKnown RBP23.22■■□□□ 1.31
LMBR1-217ENST00000485985 SAFBQ15424 915 aaKnown RBP eCLIP23.22■■□□□ 1.31
LMBR1-217ENST00000485985 PIGOQ8TEQ8 1089 aa23.22■■□□□ 1.31
LMBR1-217ENST00000485985 RSPH1Q8WYR4 309 aa23.22■■□□□ 1.31
LMBR1-217ENST00000485985 TMEM169Q96HH4 297 aa23.22■■□□□ 1.31
LMBR1-217ENST00000485985 RIPOR3Q96MK2 946 aa23.22■■□□□ 1.31
LMBR1-217ENST00000485985 DNAJB4Q9UDY4 337 aa23.22■■□□□ 1.31
LMBR1-217ENST00000485985 TSPAN1O60635 241 aa23.21■■□□□ 1.31
LMBR1-217ENST00000485985 DGAT1O75907 488 aa23.21■■□□□ 1.31
LMBR1-217ENST00000485985 PDGFBP01127 241 aaPredicted RBP23.21■■□□□ 1.31
LMBR1-217ENST00000485985 CA8P35219 290 aa23.21■■□□□ 1.31
LMBR1-217ENST00000485985 PTENP60484 403 aa23.21■■□□□ 1.31
LMBR1-217ENST00000485985 MXD4Q14582 209 aaPredicted RBP23.21■■□□□ 1.31
LMBR1-217ENST00000485985 MRPL10Q7Z7H8 261 aaKnown RBP23.21■■□□□ 1.31
LMBR1-217ENST00000485985 SORCS3Q9UPU3 1222 aa23.21■■□□□ 1.31
LMBR1-217ENST00000485985 DENND4AQ7Z401 1863 aa23.21■■□□□ 1.31
LMBR1-217ENST00000485985 C2CD4DB7Z1M9 353 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 ERLIN2O94905 339 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 ARL2P36404 184 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 MTHFRP42898 656 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 ZNF280BQ86YH2 543 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 IFNLR1Q8IU57 520 aaPredicted RBP23.2■■□□□ 1.3
LMBR1-217ENST00000485985 UBALD2Q8IYN6 164 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 VPS52Q8N1B4 723 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 SMG8Q8ND04 991 aaKnown RBP23.2■■□□□ 1.3
LMBR1-217ENST00000485985 FBXO18Q8NFZ0 1043 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 PGBD4Q96DM1 585 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 VN1R3Q9BXE9 311 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 GBP3Q9H0R5 595 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 ZBP1Q9H171 429 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 IRF2BPLQ9H1B7 796 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 FOXP1Q9H334 677 aaPredicted RBP23.2■■□□□ 1.3
LMBR1-217ENST00000485985 RSAD1Q9HA92 442 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 FAM86C1Q9NVL1 165 aa23.2■■□□□ 1.3
LMBR1-217ENST00000485985 PLXNA3P51805 1871 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 ST18O60284 1047 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 USO1O60763 962 aaKnown RBP23.19■■□□□ 1.3
LMBR1-217ENST00000485985 MED24O75448 989 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 GALTP07902 379 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms