RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 RUSC1Q9BVN2 902 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 TIPINQ9BVW5 301 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 GBP3Q9H0R5 595 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 NSUN3Q9H649 340 aaKnown RBP13.82□□□□□ -0.2
PTCD1-205ENST00000485746 RSAD1Q9HA92 442 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 UBN1Q9NPG3 1134 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 HCSTQ9UBK5 93 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 CCDC39Q9UFE4 941 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 PUF60Q9UHX1 559 aaKnown RBP13.82□□□□□ -0.2
PTCD1-205ENST00000485746 SFI1A8K8P3 1242 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 N4BP3O15049 544 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 B4GALT5O43286 388 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 NPTXRO95502 500 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 ITGB1P05556 798 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 LINC00271P0C7V0 271 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 ATF7P17544 494 aaPredicted RBP13.81□□□□□ -0.2
PTCD1-205ENST00000485746 ALDH7A1P49419 539 aaKnown RBP13.81□□□□□ -0.2
PTCD1-205ENST00000485746 PEX3P56589 373 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 MRPS5P82675 430 aaKnown RBP13.81□□□□□ -0.2
PTCD1-205ENST00000485746 GRIN1Q05586 938 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 KARSQ15046 597 aaKnown RBP13.81□□□□□ -0.2
PTCD1-205ENST00000485746 AAK1Q2M2I8 961 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 TMEM119Q4V9L6 283 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 KCNT2Q6UVM3 1135 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 CDR2LQ86X02 465 aaPredicted RBP13.81□□□□□ -0.2
PTCD1-205ENST00000485746 SPPL3Q8TCT6 385 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 POF1BQ8WVV4 589 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 RSPH1Q8WYR4 309 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 HLA-CQ95604 372 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 PRIMPOLQ96LW4 560 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 USP28Q96RU2 1077 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 ADPGKQ9BRR6 497 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 EIF2AQ9BY44 585 aaKnown RBP13.81□□□□□ -0.2
PTCD1-205ENST00000485746 CWH43Q9H720 699 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 KMT5AQ9NQR1 393 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 SPG21Q9NZD8 308 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 KANSL3Q9P2N6 904 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 PARP2Q9UGN5 583 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 KCNG1Q9UIX4 513 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 COG5Q9UP83 839 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 IPPQ9Y573 584 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 SRPRBQ9Y5M8 271 aaKnown RBP13.81□□□□□ -0.2
PTCD1-205ENST00000485746 WDR81Q562E7 1941 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 CNTNAP2Q9UHC6 1331 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 TTC3P53804 2025 aa13.81□□□□□ -0.2
PTCD1-205ENST00000485746 K7ERI5 159 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 ZC3H11AO75152 810 aaKnown RBP eCLIP13.8□□□□□ -0.2
PTCD1-205ENST00000485746 OFD1O75665 1012 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 FGF18O76093 207 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 ZSCAN22P10073 491 aaPredicted RBP13.8□□□□□ -0.2
PTCD1-205ENST00000485746 PLCG1P19174 1290 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 NCLP19338 710 aaKnown RBP13.8□□□□□ -0.2
PTCD1-205ENST00000485746 CA8P35219 290 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 PPM1AP35813 382 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 SMTNP53814 917 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 BECN1Q14457 450 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 PTPAQ15257 358 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 AMHR2Q16671 573 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 TCEAL5Q5H9L2 206 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 UBXN11Q5T124 520 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 CDCA2Q69YH5 1023 aaPredicted RBP13.8□□□□□ -0.2
PTCD1-205ENST00000485746 SLC27A1Q6PCB7 646 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 PPP4R3CPQ6ZMV5 832 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 AGMOQ6ZNB7 445 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 LRRC55Q6ZSA7 311 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 APBB1IPQ7Z5R6 666 aaPredicted RBP13.8□□□□□ -0.2
PTCD1-205ENST00000485746 MRPL10Q7Z7H8 261 aaKnown RBP13.8□□□□□ -0.2
PTCD1-205ENST00000485746 GPBP1Q86WP2 473 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 KRI1Q8N9T8 703 aaKnown RBP13.8□□□□□ -0.2
PTCD1-205ENST00000485746 ATXN2LQ8WWM7 1075 aaKnown RBP13.8□□□□□ -0.2
PTCD1-205ENST00000485746 CLIC6Q96NY7 704 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 KIFC3Q9BVG8 833 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 ZHX3Q9H4I2 956 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 IGFLR1Q9H665 355 aa13.8□□□□□ -0.2
PTCD1-205ENST00000485746 TFIP11Q9UBB9 837 aaKnown RBP13.8□□□□□ -0.2
PTCD1-205ENST00000485746 DAXXQ9UER7 740 aaPredicted RBP13.8□□□□□ -0.2
PTCD1-205ENST00000485746 COL4A6Q14031 1691 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 CARNS1A5YM72 827 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 MEIS3P2A8K0S8 358 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 NT5C1B-RDH14C9J2C7 533 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 ACKR2O00590 384 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 PBX3P40426 434 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 NPTX2P47972 431 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 SLC12A3P55017 1021 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 BCAR1P56945 870 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 UBE3AQ05086 875 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 MCM6Q14566 821 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 BMS1Q14692 1282 aaKnown RBP13.79□□□□□ -0.2
PTCD1-205ENST00000485746 SLC39A14Q15043 492 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 FAM187BQ17R55 369 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 RRAGBQ5VZM2 374 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 SMG8Q8ND04 991 aaKnown RBP13.79□□□□□ -0.2
PTCD1-205ENST00000485746 SYMPKQ92797 1274 aaKnown RBP13.79□□□□□ -0.2
PTCD1-205ENST00000485746 EPSTI1Q96J88 318 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 CCSER1Q9C0I3 900 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 FZD8Q9H461 694 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 C17orf75Q9HAS0 396 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms