RNA–Protein interactions for RNA: ENST00000485455.1

SRPK2-213, Transcript of SRSF protein kinase 2, human

TSL 3

Gene SRPK2, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRPK2-213	ENST00000485455	PODXL2	Q9NZ53	605 aa		4.42	□□□□□ -1.7
SRPK2-213	ENST00000485455	TRMT112	Q9UI30	125 aa	Known RBP	4.42	□□□□□ -1.7
SRPK2-213	ENST00000485455	SIT1	Q9Y3P8	196 aa		4.42	□□□□□ -1.7
SRPK2-213	ENST00000485455	PCDHA2	Q9Y5H9	948 aa		4.42	□□□□□ -1.7
SRPK2-213	ENST00000485455	DDX60	Q8IY21	1712 aa	Known RBP	4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	ANKRD36C	Q5JPF3	1778 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	SH3D21	A4FU49	640 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455		E9PSI1	815 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455		H7BY64	318 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	KRIT1	O00522	736 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	CYP7B1	O75881	506 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	DGKI	O75912	1065 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	APP	P05067	770 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	SCG5	P05408	212 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	ZBTB48	P10074	688 aa	Predicted RBP	4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	KLRK1	P26718	216 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	BCL6	P41182	706 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	SARS	P49591	514 aa	Known RBP	4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	GFRA1	P56159	465 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	NKX3-2	P78367	333 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	AIMP1	Q12904	312 aa	Known RBP	4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	LSAMP	Q13449	338 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	SF3B3	Q15393	1217 aa	Known RBP	4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	INF2	Q27J81	1249 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	VWA3B	Q502W6	1294 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	DACT2	Q5SW24	774 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	MBLAC2	Q68D91	279 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	ANKS3	Q6ZW76	656 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	DPH6	Q7L8W6	267 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	CARF	Q8N187	725 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	FAM43A	Q8N2R8	423 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	DEFB123	Q8N688	67 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	SYT8	Q8NBV8	401 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	PLEKHO2	Q8TD55	490 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	FAM89A	Q96GI7	184 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	BDH2	Q9BUT1	245 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	LGR4	Q9BXB1	951 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	ADAM7	Q9H2U9	754 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	EPB41L1	Q9H4G0	881 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	ST7	Q9NRC1	585 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	CLDND1	Q9NY35	253 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	FBLN5	Q9UBX5	448 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	STAP2	Q9UGK3	403 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	PALD1	Q9ULE6	856 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	PLA2G2D	Q9UNK4	145 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	STXBP5L	Q9Y2K9	1186 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	NUB1	Q9Y5A7	615 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	PCDHB4	Q9Y5E5	795 aa		4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455	ZNF646	O15015	1829 aa	Predicted RBP	4.41	□□□□□ -1.7
SRPK2-213	ENST00000485455		A0A1W2PPC1	479 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	HGS	O14964	777 aa	Predicted RBP	4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	TBX1	O43435	398 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	STK10	O94804	968 aa	Known RBP	4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	EIF2S2	P20042	333 aa	Known RBP	4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	NF2	P35240	595 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	PLP2	Q04941	152 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	MAP4K2	Q12851	820 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	SMAD4	Q13485	552 aa	Known RBP	4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	DDR2	Q16832	855 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	PRSS53	Q2L4Q9	553 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	KRT24	Q2M2I5	525 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	SLC10A6	Q3KNW5	377 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	BORA	Q6PGQ7	559 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	COPS6	Q7L5N1	327 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	MCF2L2	Q86YR7	1114 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	FAM126B	Q8IXS8	530 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	CKAP2L	Q8IYA6	745 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	LRRC47	Q8N1G4	583 aa	Known RBP	4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	KY	Q8NBH2	561 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	SLC43A3	Q8NBI5	491 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	TMEM145	Q8NBT3	493 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	GUCD1	Q96NT3	240 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	ISCA1	Q9BUE6	129 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	MTMR10	Q9NXD2	777 aa		4.4	□□□□□ -1.71
SRPK2-213	ENST00000485455	COL1A1	P02452	1464 aa	Predicted RBP	4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455		A0A1B0GTL3	188 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	CLRN2	A0PK11	232 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	SGSM2	O43147	1006 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	HTATSF1	O43719	755 aa	Known RBP	4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	PPP1R11	O60927	126 aa	Predicted RBP	4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	C8B	P07358	591 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	ADRB1	P08588	477 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	RPS8	P62241	208 aa	Known RBP	4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	PPP2R2A	P63151	447 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	HSP90AB3P	Q58FF7	597 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	STEAP3	Q658P3	488 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	MRM1	Q6IN84	353 aa	Known RBP	4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	USP53	Q70EK8	1073 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	MIB1	Q86YT6	1006 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	ADGRG2	Q8IZP9	1017 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455		Q8N1Y9	231 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	CERS5	Q8N5B7	392 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	PHOSPHO1	Q8TCT1	267 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	OPTN	Q96CV9	577 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	SGSM3	Q96HU1	749 aa		4.39	□□□□□ -1.71
SRPK2-213	ENST00000485455	IPO9	Q96P70	1041 aa	Known RBP	4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms