RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ZNF662Q6ZS27 426 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 EXOC8Q8IYI6 725 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 L2HGDHQ9H9P8 463 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 MYO1AQ9UBC5 1043 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 GUCA1BQ9UMX6 200 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 EVPLQ92817 2033 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 SLC15A5A6NIM6 579 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 DYNC1I1O14576 645 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 KRT86O43790 486 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 URI1O94763 535 aaPredicted RBP18.18■□□□□ 0.5
CTSA-207ENST00000484855 SNAI1O95863 264 aaPredicted RBP18.18■□□□□ 0.5
CTSA-207ENST00000484855 ADCYAP1R1P41586 468 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 VAV2P52735 878 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 KLHL30Q0D2K2 578 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 CETN1Q12798 172 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 CAPSQ13938 189 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 TAF1CQ15572 869 aaPredicted RBP18.18■□□□□ 0.5
CTSA-207ENST00000484855 ASTE1Q2TB18 679 aaPredicted RBP18.18■□□□□ 0.5
CTSA-207ENST00000484855 IQCEQ6IPM2 695 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 RGMBQ6NW40 437 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 GJB7Q6PEY0 223 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 PLEKHO2Q8TD55 490 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 ZCCHC17Q9NP64 241 aaKnown RBP18.18■□□□□ 0.5
CTSA-207ENST00000484855 TRIM10Q9UDY6 481 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 AJAP1Q9UKB5 411 aaPredicted RBP18.18■□□□□ 0.5
CTSA-207ENST00000484855 TFR2Q9UP52 801 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 ZBTB42B2RXF5 422 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 K7ERI5 159 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 P4HA2O15460 535 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 JAM2P57087 298 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 PPP3CAQ08209 521 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 DRP2Q13474 957 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 IER5Q5VY09 327 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 SAPCD2Q86UD0 394 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 GPD1LQ8N335 351 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 TCP11Q8WWU5 503 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 FBXL18Q96ME1 805 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 IFIH1Q9BYX4 1025 aaKnown RBP18.18■□□□□ 0.5
CTSA-207ENST00000484855 ERAP1Q9NZ08 941 aa18.18■□□□□ 0.5
CTSA-207ENST00000484855 HBP1O60381 514 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 GCLMP48507 274 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 C1orf220Q5T0J3 134 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 SLC35F6Q8N357 371 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 PPTC7Q8NI37 304 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 JPH2Q9BR39 696 aaPredicted RBP18.17■□□□□ 0.5
CTSA-207ENST00000484855 TINF2Q9BSI4 451 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 SUGCTQ9HAC7 445 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 SLC5A4Q9NY91 659 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 PCDHA13Q9Y5I0 950 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 MXI1P50539 228 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 GFPT1Q06210 699 aaPredicted RBP18.17■□□□□ 0.5
CTSA-207ENST00000484855 ENOX2Q16206 610 aaKnown RBP18.17■□□□□ 0.5
CTSA-207ENST00000484855 NPLOC4Q8TAT6 608 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 PRPF31Q8WWY3 499 aaKnown RBP18.17■□□□□ 0.5
CTSA-207ENST00000484855 EMID1Q96A84 441 aaPredicted RBP18.17■□□□□ 0.5
CTSA-207ENST00000484855 TSGA10Q9BZW7 698 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 TMEM134Q9H6X4 195 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 APEX2Q9UBZ4 518 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 DAAM1Q9Y4D1 1078 aa18.17■□□□□ 0.5
CTSA-207ENST00000484855 ZSWIM8A7E2V4 1837 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 IGKV6-21A0A0C4DH24 114 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.16■□□□□ 0.5
CTSA-207ENST00000484855 RCCD1A6NED2 376 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 TULP1O00294 542 aaPredicted RBP18.16■□□□□ 0.5
CTSA-207ENST00000484855 CTIFO43310 598 aaKnown RBP18.16■□□□□ 0.5
CTSA-207ENST00000484855 ADCY3O60266 1144 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 PIGRP01833 764 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 LGALS2P05162 132 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 KIF5AQ12840 1032 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 USP37Q86T82 979 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 LRRC71Q8N4P6 559 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 EHBP1Q8NDI1 1231 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 PSPC1Q8WXF1 523 aaKnown RBP18.16■□□□□ 0.5
CTSA-207ENST00000484855 LACRTQ9GZZ8 138 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 ABHD16BQ9H3Z7 469 aa18.16■□□□□ 0.5
CTSA-207ENST00000484855 ZHX1Q9UKY1 873 aaPredicted RBP18.16■□□□□ 0.5
CTSA-207ENST00000484855 ECM2O94769 699 aaPredicted RBP18.15■□□□□ 0.5
CTSA-207ENST00000484855 SLU7O95391 586 aaKnown RBP18.15■□□□□ 0.5
CTSA-207ENST00000484855 SLC10A3P09131 477 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 MCCD1P59942 119 aaPredicted RBP18.15■□□□□ 0.5
CTSA-207ENST00000484855 CYP24A1Q07973 514 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 MXD4Q14582 209 aaPredicted RBP18.15■□□□□ 0.5
CTSA-207ENST00000484855 IRF2BP2Q7Z5L9 587 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 PARD3BQ8TEW8 1205 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 AFG1LQ8WV93 481 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 TRAPPC12Q8WVT3 735 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 CCDC127Q96BQ5 260 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 MFSD14AQ96MC6 490 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 FAM213AQ9BRX8 229 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 DNAJC12Q9UKB3 198 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 BZW2Q9Y6E2 419 aaKnown RBP18.15■□□□□ 0.5
CTSA-207ENST00000484855 LRRIQ3A6PVS8 624 aaPredicted RBP18.15■□□□□ 0.5
CTSA-207ENST00000484855 RBAK-RBAKDNI3L0D1 243 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 RFX1P22670 979 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 STAT1P42224 750 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 LAMTOR4Q0VGL1 99 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
CTSA-207ENST00000484855 ACVR2BQ13705 512 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 EPC2Q52LR7 807 aa18.15■□□□□ 0.5
CTSA-207ENST00000484855 LMO3Q8TAP4 145 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms